RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ASPHQ12797 758 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 TRIP4Q15650 581 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 LRRC73Q5JTD7 316 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 FAM26DQ5JW98 314 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 RANBP10Q6VN20 620 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 ANKS3Q6ZW76 656 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 FUBP3Q96I24 572 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 CINPQ9BW66 212 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SLC25A51Q9H1U9 297 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.82□□□□□ -0.369e-6■■■■□ 19.7
SCAF11-209ENST00000547018 ATP5HO75947 161 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SUPT7LO94864 414 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 CALB2P22676 271 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 FMO4P31512 558 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 RAB10P61026 200 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 FAM189BP81408 668 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 HNRNPDQ14103 355 aaKnown RBP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 USP41Q3LFD5 358 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SH2D4BQ5SQS7 431 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 RNF219Q5W0B1 726 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 MAB21L3Q8N8X9 362 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SPPL2BQ8TCT7 592 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 USP13Q92995 863 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 SLC39A13Q96H72 371 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 RPL10LQ96L21 214 aaKnown RBP12.82□□□□□ -0.36
SCAF11-209ENST00000547018 KIFC1Q9BW19 673 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 TRPM5Q9NZQ8 1165 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 ZDHHC2Q9UIJ5 367 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 DNMT3LQ9UJW3 386 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 VPS28Q9UK41 221 aa12.82□□□□□ -0.36
SCAF11-209ENST00000547018 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 OR6C75A6NL08 312 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 K7ERQ8 282 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 DLX3O60479 287 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 RTN3O95197 1032 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 RPLP2P05387 115 aaKnown RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 OXCT1P55809 520 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 CYP4F8P98187 520 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 ZNF177Q13360 481 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 HABP4Q5JVS0 413 aaKnown RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 HECTD3Q5T447 861 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 TAS2R42Q7RTR8 314 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 CENPLQ8N0S6 344 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 ANKRD49Q8WVL7 239 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 ILKAPQ9H0C8 392 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 FCF1Q9Y324 198 aaKnown RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 G3V2L1 256 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 SIX3O95343 332 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 SLC11A2P49281 568 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 SLC12A1Q13621 1099 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 TAF11Q15544 211 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 CLEC6AQ6EIG7 209 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 LRRC8EQ6NSJ5 796 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 ARHGAP18Q8N392 663 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 N4BP2L2Q92802 583 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 SLC45A3Q96JT2 553 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 TSGA13Q96PP4 275 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 NOP53Q9NZM5 478 aaKnown RBP12.81□□□□□ -0.36
SCAF11-209ENST00000547018 GIMAP2Q9UG22 337 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 WASF2Q9Y6W5 498 aa12.81□□□□□ -0.36
SCAF11-209ENST00000547018 BIRC5O15392 142 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 SERPINF2P08697 491 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 CDK18Q07002 472 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 ACSBG2Q5FVE4 666 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 MANEALQ5VSG8 457 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 SCIMPQ6UWF3 145 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 DEFB107AQ8IZN7 70 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 OR4K2Q8NGD2 314 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 POLR1EQ9GZS1 481 aaKnown RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 SAR1AQ9NR31 198 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 HEATR9A2RTY3 570 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 ACSL4O60488 711 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 SNNO75324 88 aaPredicted RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 C1RP00736 705 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 CCL5P13501 91 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 ENO3P13929 434 aaPredicted RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 CSF2RAP15509 400 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 FGFR3P22607 806 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 MZF1P28698 734 aaPredicted RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 PKNOX1P55347 436 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 GNA12Q03113 381 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 CCDC15Q0P6D6 951 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 FSCBQ5H9T9 825 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 TIFABQ6ZNK6 161 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 ACMSDQ8TDX5 336 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 MICAL1Q8TDZ2 1067 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 SLC26A7Q8TE54 656 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 PYDC1Q8WXC3 89 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 CCDC162PA2VCL2 907 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 PPP6CO00743 305 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 TBL1XO60907 577 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 GOT2P00505 430 aaKnown RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 TFEBP19484 476 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 CLNS1AP54105 237 aaKnown RBP12.8□□□□□ -0.36
SCAF11-209ENST00000547018 IKBKEQ14164 716 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 MUM1Q2TAK8 710 aa12.8□□□□□ -0.36
SCAF11-209ENST00000547018 ZRANB3Q5FWF4 1079 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms