RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	TECRL	Q5HYJ1	363 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	CNST	Q6PJW8	725 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	KDELC2	Q7Z4H8	507 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	SCD5	Q86SK9	330 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	SERINC5	Q86VE9	423 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	HASPIN	Q8TF76	798 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	SOCS4	Q8WXH5	440 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	SGF29	Q96ES7	293 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	SUSD3	Q96L08	255 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	C1orf74	Q96LT6	269 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	AGO3	Q9H9G7	860 aa	Known RBP	13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	NDFIP2	Q9NV92	336 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	UTP6	Q9NYH9	597 aa	Known RBP	13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	PACSIN3	Q9UKS6	424 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	HS3ST4	Q9Y661	456 aa		13.59	□□□□□ -0.23
PPME1-208	ENST00000543525	TNFRSF10B	O14763	440 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	JUN	P05412	331 aa	Known RBP	13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	SLC2A3	P11169	496 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	CD52	P31358	61 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	LEPR	P48357	1165 aa	Known RBP	13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	RENBP	P51606	427 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	MLLT6	P55198	1093 aa	Predicted RBP	13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	FOLH1	Q04609	750 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	CEACAM7	Q14002	265 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	ADGRE1	Q14246	886 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	GRM2	Q14416	872 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	ARTN	Q5T4W7	220 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	CXCL17	Q6UXB2	119 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	C14orf80	Q86SX3	495 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	MFN1	Q8IWA4	741 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	GALNT15	Q8N3T1	639 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	ZFAND2B	Q8WV99	257 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	FATE1	Q969F0	183 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	DCUN1D1	Q96GG9	259 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	MARK4	Q96L34	752 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	MRPL1	Q9BYD6	325 aa	Known RBP	13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	ATXN3L	Q9H3M9	355 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	PIDD1	Q9HB75	910 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	MPP6	Q9NZW5	540 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525	PADI3	Q9ULW8	664 aa		13.58	□□□□□ -0.23
PPME1-208	ENST00000543525		A0A1W2PQH9	124 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	TRIM38	O00635	465 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	BCAS2	O75934	225 aa	Predicted RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	PAPSS2	O95340	614 aa	Predicted RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	IGHA2	P01877	340 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	CHN2	P52757	468 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	NDST2	P52849	883 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	PKNOX1	P55347	436 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	MRPS22	P82650	360 aa	Known RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	ROR2	Q01974	943 aa	Known RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	ITK	Q08881	620 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	ILF2	Q12905	390 aa	Known RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	STX5	Q13190	355 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	SQLE	Q14534	574 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	DSC3	Q14574	896 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	LIN52	Q52LA3	116 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	RBM20	Q5T481	1227 aa	Known RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	THEMIS2	Q5TEJ8	643 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	GALNT7	Q86SF2	657 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	SLC22A9	Q8IVM8	553 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	ADCY4	Q8NFM4	1077 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	USP13	Q92995	863 aa	Predicted RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	IMP4	Q96G21	291 aa	Known RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	TRIM4	Q9C037	500 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	UNK	Q9C0B0	810 aa	Known RBP	13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	VPS45	Q9NRW7	570 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	OSER1	Q9NX31	292 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	PCDHB8	Q9UN66	801 aa		13.58	□□□□□ -0.24
PPME1-208	ENST00000543525	PATJ	Q8NI35	1801 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525		A0A0U1RQF3	1178 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	TCAF2	A6NFQ2	919 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	TMEM233	B4DJY2	109 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	DENR	O43583	198 aa	Known RBP	13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	MGEA5	O60502	916 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	IPO13	O94829	963 aa	Known RBP	13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	RHOQ	P17081	205 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	THPO	P40225	353 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	POLE2	P56282	527 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	SULT2A1	Q06520	285 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	ACAP2	Q15057	778 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	RASIP1	Q5U651	963 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	CWF19L1	Q69YN2	538 aa	Known RBP	13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	CHSY3	Q70JA7	882 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	RNF135	Q8IUD6	432 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	SCN4B	Q8IWT1	228 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	UMODL1-AS1	Q8N2C9	162 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	PELI3	Q8N2H9	469 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	NPAS2	Q99743	824 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	OLFM1	Q99784	485 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	MEAF6	Q9HAF1	191 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	SPC25	Q9HBM1	224 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	ATP13A1	Q9HD20	1204 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	NT5M	Q9NPB1	228 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	RAB26	Q9ULW5	256 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	TLR6	Q9Y2C9	796 aa		13.57	□□□□□ -0.24
PPME1-208	ENST00000543525	CAPN8	A6NHC0	703 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525		A8MT66	165 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	SLC7A4	O43246	635 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	AP1G1	O43747	822 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms