RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RTP3Q9BQQ7 232 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 CENPKQ9BS16 269 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 C2orf49Q9BVC5 232 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 TKTL2Q9H0I9 626 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 WDCPQ9H6R7 721 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 ZNF408Q9H9D4 720 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 TREX1Q9NSU2 369 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 SLC38A7Q9NVC3 462 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 ARHGEF38Q9NXL2 777 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 UTP6Q9NYH9 597 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 RIMS3Q9UJD0 308 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 RUVBL2Q9Y230 463 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 CDYLQ9Y232 598 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 INPP5FQ9Y2H2 1132 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 ACOT9Q9Y305 439 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 DTNAQ9Y4J8 743 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 SNX10Q9Y5X0 201 aa5.25□□□□□ -1.57
ATPAF1-212ENST00000542495 PATJQ8NI35 1801 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 A0A087X1B8 175 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 SMIM31A0A1B0GVY4 71 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 FAM95CA0A1B0GW59 222 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 GOLGA8TH3BQL2 631 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 SDHDO14521 159 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 MATN3O15232 486 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 MAFKO60675 156 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 DNAJA2O60884 412 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 ANXA9O76027 345 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 ZNF865P0CJ78 1059 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 SRGAP2BP0DMP2 458 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 XRCC1P18887 633 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 GSTT1P30711 240 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 DPP6P42658 865 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 RAB27AP51159 221 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 HUNKP57058 714 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 INHBEP58166 350 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 MS4A2Q01362 244 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 TLR1Q15399 786 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 SLC14A2Q15849 920 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 LRRC36Q1X8D7 754 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 USP41Q3LFD5 358 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 MMEL1Q495T6 779 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 TBCELQ5QJ74 424 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 OLFML2BQ68BL8 750 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 KIAA0930Q6ICG6 404 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 ESRP1Q6NXG1 681 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 FAM171BQ6P995 826 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 RANBP10Q6VN20 620 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 ARHGAP36Q6ZRI8 547 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 VASH1Q7L8A9 365 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 PIWIL4Q7Z3Z4 852 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 CTU1Q7Z7A3 348 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 SLC41A1Q8IVJ1 513 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 DENND6AQ8IWF6 608 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 LILRA2Q8N149 483 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 LZTR1Q8N653 840 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 C2orf69Q8N8R5 385 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 C2CD4AQ8NCU7 369 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 ICA1LQ8NDH6 482 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 C3orf58Q8NDZ4 430 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 CATSPER1Q8NEC5 780 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 ADCY4Q8NFM4 1077 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 SPATA22Q8NHS9 363 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 DQX1Q8TE96 717 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 PPP1R13LQ8WUF5 828 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 BRI3BPQ8WY22 251 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 NXNL1Q96CM4 212 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 RCN3Q96D15 328 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 MOCOSQ96EN8 888 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 DCUN1D1Q96GG9 259 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 SMARCD1Q96GM5 515 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 TSNARE1Q96NA8 513 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 PPP1R2P1Q96PQ5 205 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 CDRT15Q96T59 188 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 TBL1YQ9BQ87 522 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 MRPL57Q9BQC6 102 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 NUF2Q9BZD4 464 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 TRIM4Q9C037 500 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 UBE2OQ9C0C9 1292 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 MRPL46Q9H2W6 279 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 EFCAB1Q9HAE3 211 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 ARNT2Q9HBZ2 717 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 GLOD4Q9HC38 313 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 DMAP1Q9NPF5 467 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 PLK2Q9NYY3 685 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 CLIC5Q9NZA1 410 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 UBP1Q9NZI7 540 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 NDUFA13Q9P0J0 144 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 XPR1Q9UBH6 696 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 BCAP29Q9UHQ4 241 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 CNOT11Q9UKZ1 510 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 SARDHQ9UL12 918 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 RAB26Q9ULW5 256 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 TCAF1Q9Y4C2 921 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 COPG1Q9Y678 874 aaKnown RBP5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 COMMD3-BMI1R4GMX3 469 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 MYLKQ15746 1914 aa5.24□□□□□ -1.57
ATPAF1-212ENST00000542495 C15orf38-AP3S2A0A0A6YYH1 394 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms