RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 FAM72AQ5TYM5 149 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 FAM72DQ6L9T8 149 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 ESRP1Q6NXG1 681 aaKnown RBP7.39□□□□□ -1.23
YBX3-209ENST00000540747 FOXR1Q6PIV2 292 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 GBP6Q6ZN66 633 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 ATG14Q6ZNE5 492 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 USP53Q70EK8 1073 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 TMPRSS9Q7Z410 1059 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 FAM72BQ86X60 149 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 FAM131BQ86XD5 332 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 DRC7Q8IY82 874 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 KLHL32Q96NJ5 620 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 GFM1Q96RP9 751 aaKnown RBP7.39□□□□□ -1.23
YBX3-209ENST00000540747 RBM15Q96T37 977 aaKnown RBP eCLIP7.39□□□□□ -1.23
YBX3-209ENST00000540747 EPAS1Q99814 870 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 EDEM3Q9BZQ6 932 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 FOXP3Q9BZS1 431 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 SLC13A1Q9BZW2 595 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 B3GNT4Q9C0J1 378 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 MAGEH1Q9H213 219 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 LRRN3Q9H3W5 708 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 EPB41L5Q9HCM4 733 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 RTN4Q9NQC3 1192 aaKnown RBP7.39□□□□□ -1.23
YBX3-209ENST00000540747 TMEM248Q9NWD8 314 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 FOXJ2Q9P0K8 574 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 HOOK1Q9UJC3 728 aaKnown RBP7.39□□□□□ -1.23
YBX3-209ENST00000540747 LOXL2Q9Y4K0 774 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 DGKBQ9Y6T7 804 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 LRRK1Q38SD2 2015 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 PRAMEF33A0A0G2JMD5 474 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 A0A1W2PQC6 194 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 TMEM110-MUSTN1A8MSY1 372 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 C9orf172C9J069 976 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 KRIT1O00522 736 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 NEMP1O14524 444 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 KDELR3O43731 214 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 PRAMEF10O60809 474 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 SRGAP2O75044 1071 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 TM7SF2O76062 418 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 TMCC1O94876 653 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 RASGRP1O95267 797 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 LSM8O95777 96 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 ALPIP09923 528 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 PNLIPP16233 465 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 ITIH1P19827 911 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 ADRA1BP35368 520 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 KRT9P35527 623 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 BLKP51451 505 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 SUOXP51687 545 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 ARSDP51689 593 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 GEMIN4P57678 1058 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 RNASE9P60153 205 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 SNRPD1P62314 119 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 NOMO3P69849 1222 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 HLTFQ14527 1009 aaKnown RBP eCLIP7.38□□□□□ -1.23
YBX3-209ENST00000540747 CLCA4Q14CN2 919 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 ELOCQ15369 112 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 KLHL40Q2TBA0 621 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 FAXCQ5TGI0 409 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 GDPD4Q6W3E5 623 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 SPRED1Q7Z699 444 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 VASH2Q86V25 355 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 C17orf82Q86X59 251 aaPredicted RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 ZFAND4Q86XD8 727 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 LURAP1LQ8IV03 231 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 CCNJLQ8IV13 435 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 SFTPA2Q8IWL1 248 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 TMEM35BQ8NCS4 154 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 OR6C4Q8NGE1 309 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 CENPIQ92674 756 aaPredicted RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 TSACCQ96A04 125 aaPredicted RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 FUBP1Q96AE4 644 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 TMEM159Q96B96 161 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 C18orf8Q96DM3 657 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 PDXPQ96GD0 296 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 CFAP57Q96MR6 1250 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 TMEM74Q96NL1 305 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 NAA15Q9BXJ9 866 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 MAGEB5Q9BZ81 275 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 CPEB1Q9BZB8 566 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 FAM117AQ9C073 453 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 TTYH3Q9C0H2 523 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 STRADBQ9C0K7 418 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 KLC2Q9H0B6 622 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 SYNCQ9H7C4 482 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 GEMIN8Q9NWZ8 242 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 PISDQ9UG56 409 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 OR12D3Q9UGF7 316 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 DNAJC12Q9UKB3 198 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 GPR34Q9UPC5 381 aa7.38□□□□□ -1.23
YBX3-209ENST00000540747 HEMK1Q9Y5R4 338 aaPredicted RBP7.38□□□□□ -1.23
YBX3-209ENST00000540747 SDK2Q58EX2 2172 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 CENPEQ02224 2701 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 ITPR2Q14571 2701 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 ZSCAN5CA6NGD5 496 aaPredicted RBP7.37□□□□□ -1.23
YBX3-209ENST00000540747 BIN1O00499 593 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 INSIG1O15503 277 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 RAMP2O60895 175 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 LRIG2O94898 1065 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms