RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ZDHHC6Q9H6R6 413 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 NOD2Q9HC29 1040 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 SERGEFQ9UGK8 458 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 PPM1HQ9ULR3 514 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 MSRB2Q9Y3D2 182 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 IGSF10Q6WRI0 2623 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 F5H423 210 aaPredicted RBP16.88■□□□□ 0.29
UBC-208ENST00000540700 LEFTY1O75610 366 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 IGSF6O95976 241 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 ETS1P14921 441 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 ENGP17813 658 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 PSMD8P48556 350 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 SNRPD1P62314 119 aaKnown RBP16.88■□□□□ 0.29
UBC-208ENST00000540700 BYSLQ13895 437 aaKnown RBP16.88■□□□□ 0.29
UBC-208ENST00000540700 CYP1B1Q16678 543 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 ARSIQ5FYB1 569 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 DRICH1Q6PGQ1 229 aaPredicted RBP16.88■□□□□ 0.29
UBC-208ENST00000540700 NCEH1Q6PIU2 408 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 C19orf48Q6RUI8 117 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 SRLQ86TD4 932 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 METTL3Q86U44 580 aaKnown RBP16.88■□□□□ 0.29
UBC-208ENST00000540700 ZSWIM9Q86XI8 627 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 TMEFF1Q8IYR6 380 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 RYBPQ8N488 228 aaPredicted RBP16.88■□□□□ 0.29
UBC-208ENST00000540700 FAM71DQ8N9W8 422 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 CCDC110Q8TBZ0 833 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 NSMCE1Q8WV22 266 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 ARRDC3Q96B67 414 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 TEKT5Q96M29 485 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 GDAP1L1Q96MZ0 367 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 HEPHQ9BQS7 1158 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 POLMQ9NP87 494 aaPredicted RBP16.88■□□□□ 0.29
UBC-208ENST00000540700 FSCN3Q9NQT6 498 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 IL36AQ9UHA7 158 aa16.88■□□□□ 0.29
UBC-208ENST00000540700 ATXN2Q99700 1313 aaKnown RBP16.88■□□□□ 0.29
UBC-208ENST00000540700 MID1O15344 667 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 PTGER3P43115 390 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 CSNK1DP48730 415 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 SCNN1BP51168 640 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 NSUN2Q08J23 767 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBC-208ENST00000540700 LPCAT2Q7L5N7 544 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 PRPF39Q86UA1 669 aaKnown RBP16.87■□□□□ 0.29
UBC-208ENST00000540700 AADATQ8N5Z0 425 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 FRMD1Q8N878 549 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 PIP4K2CQ8TBX8 421 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 OR8D1Q8WZ84 308 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 ZNF592Q92610 1267 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 RTP4Q96DX8 246 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 NUDCD1Q96RS6 583 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 SEMA3CQ99985 751 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 FRMD8P1Q9BZ68 369 aaPredicted RBP16.87■□□□□ 0.29
UBC-208ENST00000540700 GLOD4Q9HC38 313 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 TMEM74BQ9NUR3 256 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 TTLL3Q9Y4R7 772 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 THADAQ6YHU6 1953 aa16.87■□□□□ 0.29
UBC-208ENST00000540700 LOC400499M0QZD8 3231 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 TAF4O00268 1085 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 KRIT1O00522 736 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 ALOX15BO15296 676 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 IL1BP01584 269 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 CFIP05156 583 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 UGT2B4P06133 528 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 ITGAVP06756 1048 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 ZSCAN5DPP0CG00 497 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 NFKB1P19838 968 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 DRD3P35462 400 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 SKOR1P84550 965 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 TRAF2Q12933 501 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 CST6Q15828 149 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 ZNF776Q68DI1 518 aaPredicted RBP16.86■□□□□ 0.29
UBC-208ENST00000540700 KIAA1324Q6UXG2 1013 aaKnown RBP16.86■□□□□ 0.29
UBC-208ENST00000540700 CAMK1DQ8IU85 385 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 CHCHD4Q8N4Q1 142 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 SPATA22Q8NHS9 363 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 MAIP1Q8WWC4 291 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 TADA1Q96BN2 335 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 SIPA1Q96FS4 1042 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 GTPBP2Q9BX10 602 aaKnown RBP16.86■□□□□ 0.29
UBC-208ENST00000540700 POLR1EQ9GZS1 481 aaKnown RBP16.86■□□□□ 0.29
UBC-208ENST00000540700 BCCIPQ9P287 314 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBC-208ENST00000540700 AMACRQ9UHK6 382 aa16.86■□□□□ 0.29
UBC-208ENST00000540700 SMG1Q96Q15 3661 aaKnown RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 C5orf60A6NFR6 353 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 TRAFD1O14545 582 aaPredicted RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 ALDH1A2O94788 518 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 POP4O95707 220 aaKnown RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 SLC8A1P32418 973 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 COILP38432 576 aaPredicted RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 HSPA9P38646 679 aaKnown RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 RECQLP46063 649 aaPredicted RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 ATXN3P54252 364 aaPredicted RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 ITKQ08881 620 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 ANKRD20A2Q5SQ80 823 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 ANKRD20A1Q5TYW2 823 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 ANKRD20A3Q5VUR7 823 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 PARS2Q7L3T8 475 aaKnown RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 SYT12Q8IV01 421 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 TMIEQ8NEW7 156 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 MAGOHBQ96A72 148 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms