RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 BRAT1Q6PJG6 821 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 FAM181AQ8N9Y4 354 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 TP53I13Q8NBR0 393 aaPredicted RBP22.42■■□□□ 1.18
SCARB1-206ENST00000539320 ZNF641Q96N77 438 aaPredicted RBP22.42■■□□□ 1.18
SCARB1-206ENST00000539320 ZWILCHQ9H900 591 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 USP29Q9HBJ7 922 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 PCDH12Q9NPG4 1184 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 KLF15Q9UIH9 416 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 CLCA2Q9UQC9 943 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 CSNK1G3Q9Y6M4 447 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 MYLKQ15746 1914 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 H3BRJ5 948 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 AQP9O43315 295 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 PALMO75781 387 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 RGRP47804 291 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 CSNK1DP48730 415 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 HCAR3P49019 387 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 YPEL5P62699 121 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 PTK2BQ14289 1009 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 RFTN1Q14699 578 aaPredicted RBP22.41■■□□□ 1.18
SCARB1-206ENST00000539320 IRF4Q15306 451 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 UGP2Q16851 508 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 ERAP2Q6P179 960 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 CACTIN-AS1Q8N1I8 211 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 TSEN2Q8NCE0 465 aaKnown RBP22.41■■□□□ 1.18
SCARB1-206ENST00000539320 SYN2Q92777 582 aaPredicted RBP22.41■■□□□ 1.18
SCARB1-206ENST00000539320 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.41■■□□□ 1.18
SCARB1-206ENST00000539320 ATP13A3Q9H7F0 1226 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 CWC15Q9P013 229 aaKnown RBP22.41■■□□□ 1.18
SCARB1-206ENST00000539320 ATP8A1Q9Y2Q0 1164 aa22.41■■□□□ 1.18
SCARB1-206ENST00000539320 BZW2Q9Y6E2 419 aaKnown RBP22.41■■□□□ 1.18
SCARB1-206ENST00000539320 LAMA5O15230 3695 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 LY6G6EA0A0G2JKS1 128 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 TOR1BO14657 336 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 C6P13671 934 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 IL1R2P27930 398 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 SERPINA4P29622 427 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 MMP12P39900 470 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 DUSP3P51452 185 aaPredicted RBP22.4■■□□□ 1.18
SCARB1-206ENST00000539320 UBASH3AP57075 661 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 IL10RBQ08334 325 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 ACAP1Q15027 740 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 DPYSL2Q16555 572 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 SMTNL2Q2TAL5 461 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 ZCCHC8Q6NZY4 707 aaKnown RBP22.4■■□□□ 1.18
SCARB1-206ENST00000539320 C19orf48Q6RUI8 117 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 MACC1Q6ZN28 852 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 ARHGAP36Q6ZRI8 547 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 SRLQ86TD4 932 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 CAMK1DQ8IU85 385 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 PHACTR4Q8IZ21 702 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 RBFAQ8N0V3 343 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 LZTR1Q8N653 840 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 DCBLD1Q8N8Z6 715 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 LMX1AQ8TE12 382 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 BTN2A2Q8WVV5 523 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 IQCDQ96DY2 449 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 NRSN2Q9GZP1 204 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 MBNL1Q9NR56 388 aaKnown RBP22.4■■□□□ 1.18
SCARB1-206ENST00000539320 SPASTQ9UBP0 616 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 APOBEC3BQ9UH17 382 aaKnown RBP22.4■■□□□ 1.18
SCARB1-206ENST00000539320 COQ6Q9Y2Z9 468 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 U3KQA8 63 aa22.4■■□□□ 1.18
SCARB1-206ENST00000539320 ADAMTS20P59510 1910 aa22.39■■□□□ 1.18
SCARB1-206ENST00000539320 GOLGA6L19H0YKK7 550 aa22.39■■□□□ 1.17
SCARB1-206ENST00000539320 BUB1BO60566 1050 aaPredicted RBP22.39■■□□□ 1.17
SCARB1-206ENST00000539320 MT-CO3P00414 261 aa22.39■■□□□ 1.17
SCARB1-206ENST00000539320 ARL4AP40617 200 aa22.39■■□□□ 1.17
SCARB1-206ENST00000539320 ZBED6P86452 979 aa22.39■■□□□ 1.17
SCARB1-206ENST00000539320 TMCO4Q5TGY1 634 aa22.39■■□□□ 1.17
SCARB1-206ENST00000539320 ZSWIM9Q86XI8 627 aa22.39■■□□□ 1.17
SCARB1-206ENST00000539320 TBATAQ96M53 351 aa22.39■■□□□ 1.17
SCARB1-206ENST00000539320 SCUBE2Q9NQ36 999 aa22.39■■□□□ 1.17
SCARB1-206ENST00000539320 LRRK1Q38SD2 2015 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 ASXL3Q9C0F0 2248 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 ANKRD36A6QL64 1941 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 RIOK3O14730 519 aaKnown RBP22.38■■□□□ 1.17
SCARB1-206ENST00000539320 SERPING1P05155 500 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 GP1BAP07359 652 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 MYF5P13349 255 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 TCF4P15884 667 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 RTP5Q14D33 572 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 LRRC14Q15048 493 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 COL28A1Q2UY09 1125 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 DEFB133Q30KQ1 61 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 HSPH1Q92598 858 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 LRRC61Q9BV99 259 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 TCEAL2Q9H3H9 227 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-206ENST00000539320 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.38■■□□□ 1.173e-8■□□□□ 10.2
SCARB1-206ENST00000539320 NCKIPSDQ9NZQ3 722 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 SEPT3Q9UH03 358 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 AK5Q9Y6K8 562 aa22.38■■□□□ 1.17
SCARB1-206ENST00000539320 TPP1O14773 563 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 OPA1O60313 960 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 PRKCGP05129 697 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 EIF4A3P38919 411 aaKnown RBP22.37■■□□□ 1.17
SCARB1-206ENST00000539320 AP1S1P61966 158 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 BCL2L1Q07817 233 aa22.37■■□□□ 1.17
SCARB1-206ENST00000539320 PIGHQ14442 188 aaPredicted RBP22.37■■□□□ 1.17
SCARB1-206ENST00000539320 WSCD2Q2TBF2 565 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms