RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 LOC285095A0A1B0GVY8 99 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 KDELR3O43731 214 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 BAIAP3O94812 1187 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 PROCP04070 461 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 CNTFP26441 200 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 ZNF449Q6P9G9 518 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 MTDHQ86UE4 582 aaKnown RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 SPATS2Q86XZ4 545 aaKnown RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 HERC6Q8IVU3 1022 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 TMEM237Q96Q45 408 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 SHCBP1LQ9BZQ2 653 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 BPIFA1Q9NP55 256 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 HAUS2Q9NVX0 235 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 SIRPGQ9P1W8 387 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 FNIP2Q9P278 1114 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 GGA2Q9UJY4 613 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 FAM95CA0A1B0GW59 222 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 GLRA3O75311 464 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 TMCC1O94876 653 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 CBX6O95503 412 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 PRAMEF12O95522 483 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 SERPINF2P08697 491 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 FGF3P11487 239 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 EPCAMP16422 314 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 SERPINB8P50452 374 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 TAS2R39P59534 338 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 DLG1Q12959 904 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 CDH18Q13634 790 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 CAMK1Q14012 370 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 SEMA3AQ14563 771 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 NAPRTQ6XQN6 538 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 NLRP9Q7RTR0 991 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 YTHDF3Q7Z739 585 aaKnown RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 LPCAT1Q8NF37 534 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 PPP1R14CQ8TAE6 165 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 MRPS31Q92665 395 aaKnown RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 ELMO2Q96JJ3 720 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 RXFP1Q9HBX9 757 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 DONSONQ9NYP3 566 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 PRLP01236 227 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 SLC35E2BP0CK96 405 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 TARSP26639 723 aaKnown RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 CDKN1CP49918 316 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 ACTN3Q08043 901 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 SLC5A9Q2M3M2 681 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 ALYREFQ86V81 257 aaKnown RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 EFHBQ8N7U6 833 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 CLP1Q92989 425 aaKnown RBP14.23□□□□□ -0.13
ACTN1-205ENST00000538545 TADA1Q96BN2 335 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 OLFM1Q99784 485 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 MGME1Q9BQP7 344 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 FEM1AQ9BSK4 669 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 TMEM120AQ9BXJ8 343 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 ARNT2Q9HBZ2 717 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 VPS45Q9NRW7 570 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.23□□□□□ -0.135e-7■■■■□ 24
ACTN1-205ENST00000538545 TBC1D30Q9Y2I9 924 aa14.23□□□□□ -0.13
ACTN1-205ENST00000538545 ILVBLA1L0T0 632 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 HEATR9A2RTY3 570 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 A8MX80 341 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 H0YHG0 523 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 TRIM24O15164 1050 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 GRM6O15303 877 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 MYL2P10916 166 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 MBLAC2Q68D91 279 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 PIM3Q86V86 326 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 MFN1Q8IWA4 741 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 CMTM8Q8IZV2 173 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 MDGA1Q8NFP4 955 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 ING5Q8WYH8 240 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 NXNL1Q96CM4 212 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 PSKH2Q96QS6 385 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 GPR22Q99680 433 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 EBF4Q9BQW3 602 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 ACE2Q9BYF1 805 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-205ENST00000538545 KDM4CQ9H3R0 1056 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 RHOJQ9H4E5 214 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 TASP1Q9H6P5 420 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 ARMCX1Q9P291 453 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 HSFX1Q9UBD0 423 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 VPS51Q9UID3 782 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 SLC4A7Q9Y6M7 1214 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 ADH1AP07327 375 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 DLDP09622 509 aaKnown RBP14.22□□□□□ -0.13
ACTN1-205ENST00000538545 SERPINB3P29508 390 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 PRAMEP78395 509 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 RPS27LQ71UM5 84 aaKnown RBP14.22□□□□□ -0.13
ACTN1-205ENST00000538545 CENPLQ8N0S6 344 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-205ENST00000538545 TDRD5Q8NAT2 981 aaKnown RBP14.22□□□□□ -0.13
ACTN1-205ENST00000538545 TNKS2Q9H2K2 1166 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 TLE6Q9H808 572 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 SCUBE2Q9NQ36 999 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 COPG2Q9UBF2 871 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 HEY2Q9UBP5 337 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 SEPT3Q9UH03 358 aa14.22□□□□□ -0.13
ACTN1-205ENST00000538545 NEMP2A6NFY4 417 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 EFCAB14O75071 495 aa14.21□□□□□ -0.13
ACTN1-205ENST00000538545 ZNF189O75820 626 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-205ENST00000538545 GLUD1P00367 558 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms