RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SIRPB2Q5JXA9 342 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 ADGRF1Q5T601 910 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 IL31Q6EBC2 164 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 FAM45BPQ6NSW5 357 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 ITIH5Q86UX2 942 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 CILP2Q8IUL8 1156 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 TNS4Q8IZW8 715 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 FAM13CQ8NE31 585 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 FAM45AQ8TCE6 357 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 FAR2Q96K12 515 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 CINPQ9BW66 212 aaPredicted RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 NCKIPSDQ9NZQ3 722 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 STOML2Q9UJZ1 356 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 VPS9D1Q9Y2B5 631 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 SSX2IPQ9Y2D8 614 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 SHROOM3Q8TF72 1996 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 NUP205Q92621 2012 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 TYW5A2RUC4 315 aaKnown RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 GOLGA8TH3BQL2 631 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 PFDN6O15212 129 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 COCHO43405 550 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 URODP06132 367 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 HMGA1P17096 107 aaKnown RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 CHRNA4P43681 627 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 IDH3AP50213 366 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 CCL23P55773 120 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 MAXP61244 160 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 MPP1Q00013 466 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 IRF9Q00978 393 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 HSF5Q4G112 596 aaPredicted RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 TLDC1Q6P9B6 456 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 SLC41A1Q8IVJ1 513 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 SLC22A9Q8IVM8 553 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 FSTL5Q8N475 847 aaPredicted RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 CLSTN3Q9BQT9 956 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 GATA5Q9BWX5 397 aaPredicted RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 CADM1Q9BY67 442 aaKnown RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 ATXN3LQ9H3M9 355 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 DCLRE1BQ9H816 532 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 ZNF358Q9NW07 568 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 TAS2R1Q9NYW7 299 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMG6-203ENST00000536871 SLC2A6Q9UGQ3 507 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 TBC1D30Q9Y2I9 924 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 ZFP37Q9Y6Q3 630 aaPredicted RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 NYNRINQ9P2P1 1898 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 TARM1B6A8C7 271 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 HDAC3O15379 428 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 PHGDHO43175 533 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 LYPLA1O75608 230 aaPredicted RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 RPP40O75818 363 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 GLP2RO95838 553 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 RHOCP08134 193 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 LTA4HP09960 611 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 ATP5F1P24539 256 aaPredicted RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 HOXD9P28356 352 aaPredicted RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 PPM1AP35813 382 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 ACVRL1P37023 503 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 RPL14P50914 215 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 RAP1GDS1P52306 607 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 ALDH18A1P54886 795 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 GALNT1Q10472 559 aaPredicted RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 ACAP2Q15057 778 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 TCTN1Q2MV58 587 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 SPOUT1Q5T280 376 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 EPGNQ6UW88 154 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 CMTR2Q8IYT2 770 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 CENPLQ8N0S6 344 aaPredicted RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 SLC39A11Q8N1S5 342 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 PGBD5Q8N414 524 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 TDRD5Q8NAT2 981 aaKnown RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 OR13J1Q8NGT2 312 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 AGAP11Q8TF27 550 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 USP13Q92995 863 aaPredicted RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 TOP1MTQ969P6 601 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 CNDP1Q96KN2 507 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 OMDQ99983 421 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 ZNF395Q9H8N7 513 aaPredicted RBP13.66□□□□□ -0.22
SMG6-203ENST00000536871 RNPEPL1Q9HAU8 725 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 CYP4F11Q9HBI6 524 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 TBX21Q9UL17 535 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 VWA7Q9Y334 891 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 YIPF1Q9Y548 306 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 ASB3Q9Y575 518 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 NUMBLQ9Y6R0 609 aa13.66□□□□□ -0.22
SMG6-203ENST00000536871 B2RBV5 119 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 F8W8V4 182 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 LDB2O43679 373 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 STC2O76061 302 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 SAT1P21673 171 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
SMG6-203ENST00000536871 GRIA4P48058 902 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 EPHB3P54753 998 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 TAS2R39P59534 338 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 NAA20P61599 178 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 TLE2Q04725 743 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 TUBB3Q13509 450 aa13.65□□□□□ -0.22
SMG6-203ENST00000536871 SMAD1Q15797 465 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms