RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	DSCR9	P59020	149 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	UFM1	P61960	85 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	GRIK3	Q13003	919 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	GPS2	Q13227	327 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	RUNX2	Q13950	521 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	MYBPC2	Q14324	1141 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	HSPB2	Q16082	182 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	EDRF1	Q3B7T1	1238 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	HSP90AB4P	Q58FF6	505 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	ZNF766	Q5HY98	468 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	FNBP1L	Q5T0N5	605 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	JAKMIP3	Q5VZ66	844 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	HEPHL1	Q6MZM0	1159 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	FBXO46	Q6PJ61	603 aa	Predicted RBP	3.56	□□□□□ -1.84
RDX-215	ENST00000533961	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	3.56	□□□□□ -1.84
RDX-215	ENST00000533961	TRIL	Q7L0X0	811 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	ZNF367	Q7RTV3	350 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	PATL1	Q86TB9	770 aa	Known RBP	3.56	□□□□□ -1.84
RDX-215	ENST00000533961	RBM23	Q86U06	439 aa	Known RBP	3.56	□□□□□ -1.84
RDX-215	ENST00000533961	FAM160B2	Q86V87	743 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	TMPRSS12	Q86WS5	348 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	KIAA2013	Q8IYS2	634 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	ADAMTS14	Q8WXS8	1223 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	DNASE2B	Q8WZ79	361 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	NEUROG1	Q92886	237 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	ERGIC1	Q969X5	290 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	TMEM18	Q96B42	140 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	PABPC5	Q96DU9	382 aa	Known RBP	3.56	□□□□□ -1.84
RDX-215	ENST00000533961	MSTO1	Q9BUK6	570 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	TKTL2	Q9H0I9	626 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	C6orf106	Q9H6K1	298 aa	Predicted RBP	3.56	□□□□□ -1.84
RDX-215	ENST00000533961	WASH6P	Q9NQA3	447 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	BABAM1	Q9NWV8	329 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	SEL1L	Q9UBV2	794 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	ERRFI1	Q9UJM3	462 aa	Predicted RBP	3.56	□□□□□ -1.84
RDX-215	ENST00000533961	SUFU	Q9UMX1	484 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	RAI2	Q9Y5P3	530 aa		3.56	□□□□□ -1.84
RDX-215	ENST00000533961	DENND3	A2RUS2	1198 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	KDM4E	B2RXH2	506 aa	Predicted RBP	3.55	□□□□□ -1.84
RDX-215	ENST00000533961	TIMM23	O14925	209 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	RGS11	O94810	467 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	IGKV3-20	P01619	116 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	TFPI	P10646	304 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	PLA2G2A	P14555	144 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	XBP1	P17861	261 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	TNFRSF8	P28908	595 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	ICAM3	P32942	547 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	TLE2	Q04725	743 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	NFATC4	Q14934	902 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	HLF	Q16534	295 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	COL28A1	Q2UY09	1125 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	DCAF6	Q58WW2	860 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	PRAMEF19	Q5SWL8	479 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	TMEM81	Q6P7N7	255 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	IL20RB	Q6UXL0	311 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	LRRC8D	Q7L1W4	858 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	PRSS45	Q7RTY3	260 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	TEX45	Q8NA69	505 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	USP38	Q8NB14	1042 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	ZMIZ2	Q8NF64	920 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	ARRDC2	Q8TBH0	407 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	BBS4	Q96RK4	519 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	ENTPD7	Q9NQZ7	604 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	SMC4	Q9NTJ3	1288 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	C20orf141	Q9NUB4	165 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	GJD2	Q9UKL4	321 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	MKLN1	Q9UL63	735 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	TBX20	Q9UMR3	447 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	PCDHGB5	Q9Y5G0	923 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	CYP46A1	Q9Y6A2	500 aa		3.55	□□□□□ -1.84
RDX-215	ENST00000533961	C17orf113	A0A1B0GUU1	675 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961		A0A1B0GVC2	190 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	TYW5	A2RUC4	315 aa	Known RBP	3.54	□□□□□ -1.84
RDX-215	ENST00000533961	BTBD18	B2RXH4	712 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	BCAT2	O15382	392 aa	Predicted RBP	3.54	□□□□□ -1.84
RDX-215	ENST00000533961	TGFB1I1	O43294	461 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	ACAA1	P09110	424 aa	Predicted RBP	3.54	□□□□□ -1.84
RDX-215	ENST00000533961	FCGR1A	P12314	374 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	SLC2A4	P14672	509 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	DAO	P14920	347 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	YWHAQ	P27348	245 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	DCTD	P32321	178 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	TTK	P33981	857 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	PSMC2	P35998	433 aa	Known RBP	3.54	□□□□□ -1.84
RDX-215	ENST00000533961	PAFAH1B1	P43034	410 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	GPR12	P47775	334 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	PDLIM4	P50479	330 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	ABAT	P80404	500 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	ECT2L	Q008S8	904 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	TBL3	Q12788	808 aa	Known RBP	3.54	□□□□□ -1.84
RDX-215	ENST00000533961	DCTN2	Q13561	401 aa	Known RBP	3.54	□□□□□ -1.84
RDX-215	ENST00000533961	PALB2	Q86YC2	1186 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	PARP16	Q8N5Y8	322 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	GJC3	Q8NFK1	279 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	PERP	Q96FX8	193 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	ZC3HAV1L	Q96H79	300 aa	Known RBP	3.54	□□□□□ -1.84
RDX-215	ENST00000533961	HES6	Q96HZ4	224 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	DUX5	Q96PT3	197 aa		3.54	□□□□□ -1.84
RDX-215	ENST00000533961	SEC62	Q99442	399 aa	Known RBP	3.54	□□□□□ -1.84
RDX-215	ENST00000533961	FUZ	Q9BT04	418 aa		3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms