RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CTCFLQ8NI51 663 aaPredicted RBP3□□□□□ -1.93
BRCA2-205ENST00000533776 CSGALNACT1Q8TDX6 532 aa3□□□□□ -1.93
BRCA2-205ENST00000533776 USP13Q92995 863 aaPredicted RBP3□□□□□ -1.93
BRCA2-205ENST00000533776 KTI12Q96EK9 354 aaPredicted RBP3□□□□□ -1.93
BRCA2-205ENST00000533776 C3orf30Q96M34 536 aa3□□□□□ -1.93
BRCA2-205ENST00000533776 RMDN3Q96TC7 470 aa3□□□□□ -1.93
BRCA2-205ENST00000533776 MMTAG2Q9BU76 263 aaKnown RBP3□□□□□ -1.93
BRCA2-205ENST00000533776 DACT1Q9NYF0 836 aa3□□□□□ -1.93
BRCA2-205ENST00000533776 ZNF224Q9NZL3 707 aa3□□□□□ -1.93
BRCA2-205ENST00000533776 SLCO3A1Q9UIG8 710 aa3□□□□□ -1.93
BRCA2-205ENST00000533776 SIX4Q9UIU6 781 aa3□□□□□ -1.93
BRCA2-205ENST00000533776 VDAC3Q9Y277 283 aa3□□□□□ -1.93
BRCA2-205ENST00000533776 HSPA12AO43301 675 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 ATP2C2O75185 946 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 PEX14O75381 377 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 GAGE7O76087 117 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 SERPINC1P01008 464 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 CSTBP04080 98 aaKnown RBP2.99□□□□□ -1.93
BRCA2-205ENST00000533776 GAGE12FP0CL80 117 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 GAGE12GP0CL81 117 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 GAGE12IP0CL82 117 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 CETPP11597 493 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 CENPAP49450 140 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 PRKAA2P54646 552 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 BRWD1-AS2P59051 145 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 GAGE1Q13065 139 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 GAGE4Q13068 117 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 BIRC2Q13490 618 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 BLMHQ13867 455 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 SMAD1Q15797 465 aaKnown RBP2.99□□□□□ -1.93
BRCA2-205ENST00000533776 ACCSLQ4AC99 568 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 ZNF484Q5JVG2 852 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 GJB7Q6PEY0 223 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 CCDC174Q6PII3 467 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 SLC26A9Q7LBE3 791 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 ZC3HC1Q86WB0 502 aaKnown RBP2.99□□□□□ -1.93
BRCA2-205ENST00000533776 LURAP1LQ8IV03 231 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 CIARTQ8N365 385 aaPredicted RBP2.99□□□□□ -1.93
BRCA2-205ENST00000533776 DNAAF1Q8NEP3 725 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 LINS1Q8NG48 757 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 CREB3L4Q8TEY5 395 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 FIG4Q92562 907 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 TAF15Q92804 592 aaKnown RBP eCLIP2.99□□□□□ -1.93
BRCA2-205ENST00000533776 DUX3Q96PT4 197 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 RPS6KC1Q96S38 1066 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 C1QTNF5Q9BXJ0 243 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 TAF1DQ9H5J8 278 aaPredicted RBP2.99□□□□□ -1.93
BRCA2-205ENST00000533776 ZNF334Q9HCZ1 680 aaPredicted RBP2.99□□□□□ -1.93
BRCA2-205ENST00000533776 PTPRHQ9HD43 1115 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 ENTPD7Q9NQZ7 604 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 ZFP57Q9NU63 452 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 ANKRD10Q9NXR5 420 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 KCNS2Q9ULS6 477 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 CLDN16Q9Y5I7 305 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 MMP24Q9Y5R2 645 aa2.99□□□□□ -1.93
BRCA2-205ENST00000533776 CPED1A4D0V7 1026 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 C16orf97H3BN30 126 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 RGS11O94810 467 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 TBX6O95947 436 aaPredicted RBP2.98□□□□□ -1.93
BRCA2-205ENST00000533776 TTKP33981 857 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 CHKAP35790 457 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 VEGFCP49767 419 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 FUT6P51993 359 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 ERVK11-1P61568 191 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 GOLGA8FQ08AF8 430 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 ZNF155Q12901 538 aaPredicted RBP2.98□□□□□ -1.93
BRCA2-205ENST00000533776 TIGD6Q17RP2 521 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 TUBB8Q3ZCM7 444 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 C14orf177Q52M58 125 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 PAPPA-AS1Q5QFB9 102 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 NAPEPLDQ6IQ20 393 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 CES5AQ6NT32 575 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 SLC9B2Q86UD5 537 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 EPHX4Q8IUS5 362 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 ZMIZ2Q8NF64 920 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 OR13A1Q8NGR1 328 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 OR6Y1Q8NGX8 325 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 TMEM19Q96HH6 336 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 RBM17Q96I25 401 aaKnown RBP2.98□□□□□ -1.93
BRCA2-205ENST00000533776 G6PC2Q9NQR9 355 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 CYSLTR2Q9NS75 346 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 SPATS2LQ9NUQ6 558 aaKnown RBP2.98□□□□□ -1.93
BRCA2-205ENST00000533776 IFT80Q9P2H3 777 aaPredicted RBP2.98□□□□□ -1.93
BRCA2-205ENST00000533776 GRHPRQ9UBQ7 328 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 CNPY2Q9Y2B0 182 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 ZNF711Q9Y462 761 aa2.98□□□□□ -1.93
BRCA2-205ENST00000533776 SNED1Q8TER0 1413 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 TYW5A2RUC4 315 aaKnown RBP2.97□□□□□ -1.93
BRCA2-205ENST00000533776 EDIL3O43854 480 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 ZIC3O60481 467 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 TIPRLO75663 272 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 LDHAP00338 332 aaKnown RBP2.97□□□□□ -1.93
BRCA2-205ENST00000533776 MARK3P27448 753 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 TRAPPC10P48553 1259 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 ECT2LQ008S8 904 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 OASLQ15646 514 aaKnown RBP2.97□□□□□ -1.93
BRCA2-205ENST00000533776 CCDC6Q16204 474 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 ATP13A5Q4VNC0 1218 aa2.97□□□□□ -1.93
BRCA2-205ENST00000533776 PLA2G4FQ68DD2 849 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms