RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TMEM132DQ14C87 1099 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 UBE2UQ5VVX9 321 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 IL23RQ5VWK5 629 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC9A4Q6AI14 798 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PAOXQ6QHF9 649 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ADGRD1Q6QNK2 874 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 HERC6Q8IVU3 1022 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DDIASQ8IXT1 998 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ELMOD1Q8N336 334 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PCDH20Q8N6Y1 951 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MCUQ8NE86 351 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RDM1Q8NG50 284 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DENND1AQ8TEH3 1009 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 CPA5Q8WXQ8 436 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DHX38Q92620 1227 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PRR11Q96HE9 360 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 C8orf48Q96LL4 319 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 CDK5RAP1Q96SZ6 601 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ADI1Q9BV57 179 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 IL1RL2Q9HB29 575 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PARVAQ9NVD7 372 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF224Q9NZL3 707 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 B3GNT3Q9Y2A9 372 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PCDHGA10Q9Y5H3 936 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RGPD3A6NKT7 1758 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RGPD4Q7Z3J3 1758 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MEIS3P2A8K0S8 358 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 E7ENX8 843 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 BTN3A3O00478 584 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 TBX1O43435 398 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 CST8O60676 142 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PROSCO94903 275 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 CALB1P05937 261 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 YES1P07947 543 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RGS7P49802 495 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ACAP2Q15057 778 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DUOXA2Q1HG44 320 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DENND5AQ6IQ26 1287 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 TRIM72Q6ZMU5 477 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RFPL4BQ6ZWI9 263 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 GALNT7Q86SF2 657 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ZC3H7AQ8IWR0 971 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DSELQ8IZU8 1212 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM161BQ8NDZ6 487 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 FBXL13Q8NEE6 735 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 VPS37AQ8NEZ2 397 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 C18orf25Q96B23 403 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 NACC2Q96BF6 587 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ZHX1-C8orf76Q96EF9 292 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PKP2Q99959 881 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 NEURL2Q9BR09 285 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 CLEC4MQ9H2X3 399 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 C11orf49Q9H6J7 331 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ANKMY1Q9P2S6 941 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 V9GYQ6 96 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MAP1BP46821 2468 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ATP8B3O60423 1300 aa6.84□□□□□ -1.32
TGFBR3-209ENST00000532540 PDPK1O15530 556 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 NUAK1O60285 661 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 AVILO75366 819 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 BPGMP07738 259 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 SMIM18P0DKX4 95 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 IFI30P13284 250 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 GARTP22102 1010 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PIK3R1P27986 724 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PSME3P61289 254 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PRKCQQ04759 706 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 DGCR6Q14129 220 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PON2Q15165 354 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 CCDC85BQ15834 202 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 FGD3Q5JSP0 725 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 KCNT1Q5JUK3 1230 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 SIGIRRQ6IA17 410 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 FBXL19Q6PCT2 694 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 PLPPR4Q7Z2D5 763 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 IGFN1Q86VF2 1251 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 BRSK2Q8IWQ3 736 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 UNC45BQ8IWX7 931 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 C8orf59Q8N0T1 100 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 URGCPQ8TCY9 931 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 TAS1R2Q8TE23 839 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 MBOAT7Q96N66 472 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 HPS4Q9NQG7 708 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 MTRRQ9UBK8 725 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 UBA2Q9UBT2 640 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 MAFBQ9Y5Q3 323 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 TRPV2Q9Y5S1 764 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 NFASCO94856 1347 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 NAV1Q8NEY1 1877 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 SLCO1B7G3V0H7 640 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 BUD23O43709 281 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 HUS1O60921 280 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 TIPRLO75663 272 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 GRAP2O75791 330 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC4A1P02730 911 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 CNTFP26441 200 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 ICAM3P32942 547 aa6.83□□□□□ -1.32
TGFBR3-209ENST00000532540 GRIA3P42263 894 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms