RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 HNRNPH1P31943 449 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 SMAD3P84022 425 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 SLC20A2Q08357 652 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 MPP7Q5T2T1 576 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 LIPMQ5VYY2 423 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 FBXW10Q5XX13 1052 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 KLC3Q6P597 504 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 SDCCAG8Q86SQ7 713 aaPredicted RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 PACS2Q86VP3 889 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 CILP2Q8IUL8 1156 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 DENND6AQ8IWF6 608 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 KIRREL3Q8IZU9 778 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 PLD6Q8N2A8 252 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 ELMOD1Q8N336 334 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 OR13J1Q8NGT2 312 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 TTC8Q8TAM2 541 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 MAGEC3Q8TD91 643 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 PDCD6IPQ8WUM4 868 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 TMA16Q96EY4 203 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 ELMO2Q96JJ3 720 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 TRIB3Q96RU7 358 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 MRPL57Q9BQC6 102 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 ADGRE3Q9BY15 652 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 ZBP1Q9H171 429 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 CAB39LQ9H9S4 337 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 SCUBE2Q9NQ36 999 aa14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.87□□□□□ -0.03
ECHDC1-220ENST00000528402 MYLKQ15746 1914 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 DNAH12Q6ZR08 3092 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 C2orf78A6NCI8 922 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 PFDN6O15212 129 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 RPP40O75818 363 aaKnown RBP14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 FGF18O76093 207 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 FGF19O95750 216 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 C1RP00736 705 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 LRG1P02750 347 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 RBP1P09455 135 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 SLC35E2BP0CK96 405 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 T-ENOLP0DO92 83 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 CDC25CP30307 473 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 AQP5P55064 265 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 SLC7A9P82251 487 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 HTRA4P83105 476 aaPredicted RBP14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 MPP1Q00013 466 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 ITGA9Q13797 1035 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 CYTH1Q15438 398 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 FAM83EQ2M2I3 478 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 CTC1Q2NKJ3 1217 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 AGAP9Q5VTM2 703 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 RNF219Q5W0B1 726 aaPredicted RBP14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 FAM117BQ6P1L5 589 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 Q6ZNB5 142 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 TMEM150AQ86TG1 271 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 SLC41A1Q8IVJ1 513 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 CPXM2Q8N436 756 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 OR6P1Q8NGX9 317 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 HDAC10Q969S8 669 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 SCYL1Q96KG9 808 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 MUC3BQ9H195 1237 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 MRPL46Q9H2W6 279 aaKnown RBP14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 IL21Q9HBE4 155 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 POPDC3Q9HBV1 291 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 HACD3Q9P035 362 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 VPS9D1Q9Y2B5 631 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 DNAJC16Q9Y2G8 782 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 VWA7Q9Y334 891 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 PLXNA4Q9HCM2 1894 aa14.86□□□□□ -0.03
ECHDC1-220ENST00000528402 CCDC78A2IDD5 438 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 C2orf81A6NN90 581 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 SOBPA7XYQ1 873 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 H0Y626 953 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 GFRA2O00451 464 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 FCHO1O14526 889 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 MUSKO15146 869 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 LUC7L3O95232 432 aaKnown RBP14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 TOP3BO95985 862 aaKnown RBP14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 ADH1AP07327 375 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 DNAJB13P59910 316 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 PPIGQ13427 754 aaKnown RBP eCLIP14.85□□□□□ -0.038e-6■■■■□ 22.7
ECHDC1-220ENST00000528402 IHHQ14623 411 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 TAF1AQ15573 450 aaPredicted RBP14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 DLG2Q15700 870 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 SNCBQ16143 134 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 METTL21CQ5VZV1 264 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 FAM45BPQ6NSW5 357 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 LILRA6Q6PI73 481 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 HTR3DQ70Z44 454 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 GPATCH11Q8N954 259 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 FAM45AQ8TCE6 357 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 CLP1Q92989 425 aaKnown RBP14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 ZFRQ96KR1 1074 aaKnown RBP14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 RILPQ96NA2 401 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 GCNAQ96QF7 691 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 TCF12Q99081 682 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 OMDQ99983 421 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 C19orf43Q9BQ61 176 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 EMILIN2Q9BXX0 1053 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 C20orf27Q9GZN8 174 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 ILKAPQ9H0C8 392 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms