RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ANKEF1Q9NU02 776 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 NCKIPSDQ9NZQ3 722 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 CRYL1Q9Y2S2 319 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 INSL5Q9Y5Q6 135 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 CLSPNQ9HAW4 1339 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 GFPT2O94808 682 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 CLDN7O95471 211 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 TOMM40O96008 361 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 IGHDP01880 384 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 XBP1P17861 261 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 MMP14P50281 582 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 CDH12P55289 794 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 LINC00205P59089 165 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 NEXNQ0ZGT2 675 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 TRAF1Q13077 416 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 EDRF1Q3B7T1 1238 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 GPATCH4Q5T3I0 446 aaKnown RBP6.11□□□□□ -1.43
PCF11-202ENST00000528336 MOB3CQ70IA8 216 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 PRSS45Q7RTY3 260 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 SNX32Q86XE0 403 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 TMC8Q8IU68 726 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 ESX1Q8N693 406 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 ZNF366Q8N895 744 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 HTRA1Q92743 480 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 ZNF622Q969S3 477 aaKnown RBP eCLIP6.11□□□□□ -1.43
PCF11-202ENST00000528336 ELP4Q96EB1 424 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 KLHL31Q9H511 634 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 PEMTQ9UBM1 199 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 LRRIQ1Q96JM4 1722 aa6.11□□□□□ -1.43
PCF11-202ENST00000528336 A0A096LPK6 155 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 ANKRD18BA2A2Z9 1011 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 GTPBP10A4D1E9 387 aaKnown RBP6.1□□□□□ -1.43
PCF11-202ENST00000528336 BECN2A8MW95 431 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 I6L893 689 aaPredicted RBP6.1□□□□□ -1.43
PCF11-202ENST00000528336 GUCY1B2O75343 617 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 MYZAPP0CAP1 466 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 ARSBP15848 533 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 GGT5P36269 586 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 PIK3CAP42336 1068 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 GPD2P43304 727 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 TUBP50607 506 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 RASSF2P50749 326 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 PMS2P54278 862 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 CDH15P55291 814 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 VAMP2P63027 116 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 DUSP6Q16828 381 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 PLBD1Q6P4A8 553 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 FAM83HQ6ZRV2 1179 aaPredicted RBP6.1□□□□□ -1.43
PCF11-202ENST00000528336 HEATR4Q86WZ0 1026 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 PALB2Q86YC2 1186 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 CADM3Q8N126 398 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
PCF11-202ENST00000528336 SLC35F5Q8WV83 523 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 URB1-AS1Q96HZ7 61 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 APOLD1Q96LR9 279 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 GFM1Q96RP9 751 aaKnown RBP6.1□□□□□ -1.43
PCF11-202ENST00000528336 SLC26A6Q9BXS9 759 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 INTS2Q9H0H0 1204 aaKnown RBP6.1□□□□□ -1.43
PCF11-202ENST00000528336 CATSPERBQ9H7T0 1116 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 IL1RAPL1Q9NZN1 696 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 ABCA9Q8IUA7 1624 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 TIAM1Q13009 1591 aa6.1□□□□□ -1.43
PCF11-202ENST00000528336 MAGI3Q5TCQ9 1506 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 CD109Q6YHK3 1445 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 MTUS2Q5JR59 1369 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 KIF13AQ9H1H9 1805 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 C17orf113A0A1B0GUU1 675 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 A0A1B0GVT2 93 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 ARHGAP10A1A4S6 786 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 FAM90A10PA6NDY2 464 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 B4E171 279 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 URODP06132 367 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 MMP3P08254 477 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 CDC25AP30304 524 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 RFX5P48382 616 aaPredicted RBP6.09□□□□□ -1.43
PCF11-202ENST00000528336 SLC18A2Q05940 514 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 ATG9BQ674R7 924 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 C17orf99Q6UX52 265 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 CCDC129Q6ZRS4 1044 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 NEK10Q6ZWH5 1172 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 ZNF367Q7RTV3 350 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 LURAP1LQ8IV03 231 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 HSCBQ8IWL3 235 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 TNIP2Q8NFZ5 429 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 BICD2Q8TD16 824 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 TBC1D22AQ8WUA7 517 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 OIT3Q8WWZ8 545 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 CAMK1GQ96NX5 476 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 PLAC1Q9HBJ0 212 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 PCDHGB5Q9Y5G0 923 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 CFAP43Q8NDM7 1665 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 KIF14Q15058 1648 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 MAP3K4Q9Y6R4 1608 aa6.09□□□□□ -1.43
PCF11-202ENST00000528336 EHBP1L1Q8N3D4 1523 aa6.09□□□□□ -1.44
PCF11-202ENST00000528336 LRRC9Q6ZRR7 1453 aa6.09□□□□□ -1.44
PCF11-202ENST00000528336 CHL1O00533 1208 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 LIASO43766 372 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 NTN1O95631 604 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 GPR12P47775 334 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 ZP1P60852 638 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms