RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 GOLPH3Q9H4A6 298 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 DHX35Q9H5Z1 703 aaKnown RBP3.92□□□□□ -1.78
C11orf54-204ENST00000527003 NOL6Q9H6R4 1146 aaKnown RBP3.92□□□□□ -1.78
C11orf54-204ENST00000527003 LRRC19Q9H756 370 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 PCDH18Q9HCL0 1135 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 ZNF334Q9HCZ1 680 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-204ENST00000527003 TDP1Q9NUW8 608 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 CLDND1Q9NY35 253 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 COX16Q9P0S2 106 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 CLEC1BQ9P126 229 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 SFMBT1Q9UHJ3 866 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 CD207Q9UJ71 328 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 CDH7Q9ULB5 785 aa3.92□□□□□ -1.78
C11orf54-204ENST00000527003 PACSIN2Q9UNF0 486 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-204ENST00000527003 DRG1Q9Y295 367 aaKnown RBP3.92□□□□□ -1.78
C11orf54-204ENST00000527003 TRIOBPQ9H2D6 2365 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 TSC2P49815 1807 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 LAMA3Q16787 3333 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 A0A1B0GVM2 712 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ILVBLA1L0T0 632 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 EFCAB8A8MWE9 144 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 E9PAM4 449 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 K7ESM1 405 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 LEFTY2O00292 366 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 PPP1R12AO14974 1030 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MCF2LO15068 1137 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MSI1O43347 362 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CREB3O43889 395 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CST8O60676 142 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 SRGAP2O75044 1071 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MOSPD3O75425 235 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ECI2O75521 394 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 STK10O94804 968 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 SLU7O95391 586 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 GLP2RO95838 553 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 GAS8O95995 478 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MOCS2O96007 188 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ITGAVP06756 1048 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 EPHX1P07099 455 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CD3EP07766 207 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 HMBSP08397 361 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MSL3P1P0C860 447 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 FOSL2P15408 326 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 TCF4P15884 667 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 PRKCAP17252 672 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 TACR2P21452 398 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 IL4RP24394 825 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MCM3P25205 808 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CORO1AP31146 461 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CXCR5P32302 372 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ACTN2P35609 894 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 GJC1P36383 396 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CCR2P41597 374 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MARCKSL1P49006 195 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 NDST2P52849 883 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ATXN1P54253 815 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 GEMIN4P57678 1058 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 YBEYP58557 167 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 PITX1P78337 314 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CYP4F8P98187 520 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 KLF1Q13351 362 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ZNF177Q13360 481 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 SMAD4Q13485 552 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 SLC12A1Q13621 1099 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 BYSLQ13895 437 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 DPYSQ14117 519 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 DHX34Q14147 1143 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 RTP5Q14D33 572 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 PAFAH1B3Q15102 231 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CYP1B1Q16678 543 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 AAK1Q2M2I8 961 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 SLC5A9Q2M3M2 681 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 PARP15Q460N3 678 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ATP13A4Q4VNC1 1196 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MPPE1Q53F39 396 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MS4A13Q5J8X5 152 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 HABP4Q5JVS0 413 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 PIK3R6Q5UE93 754 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MANEALQ5VSG8 457 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 DCAF12L1Q5VU92 463 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CWF19L1Q69YN2 538 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 TXNRD3NBQ6F5E7 133 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 RWDD4Q6NW29 188 aaKnown RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 FBXL22Q6P050 247 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MFSD7Q6UXD7 560 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CHSY1Q86X52 802 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 RFX6Q8HWS3 928 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 DENND1CQ8IV53 801 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 CDKL3Q8IVW4 592 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 ARID3BQ8IVW6 561 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 YAF2Q8IY57 180 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 UMODL1-AS1Q8N2C9 162 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 MMGT1Q8N4V1 131 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 DEFB123Q8N688 67 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 PLD5Q8N7P1 536 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 C12orf76Q8N812 135 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-204ENST00000527003 NAT16Q8N8M0 369 aa3.91□□□□□ -1.78
C11orf54-204ENST00000527003 RTL3Q8N8U3 475 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms