RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 TNFP01375 233 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 PLEKP08567 350 aaPredicted RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 CYP11B1P15538 503 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 WT1P19544 449 aaPredicted RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 ETFBP38117 255 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 PDX1P52945 283 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 BPIFB4P59827 614 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 SRP54P61011 504 aaKnown RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 RHOAP61586 193 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 SKOR1P84550 965 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 TYRO3Q06418 890 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 MTA1Q13330 715 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 INPP5AQ14642 412 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 LRRC14Q15048 493 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 CYTH1Q15438 398 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 CCDC14Q49A88 953 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 MANEAQ5SRI9 462 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 PHF19Q5T6S3 580 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 TAF8Q7Z7C8 310 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 FAM71AQ8IYT1 594 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 CCDC185Q8N715 623 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 PAF1Q8N7H5 531 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 TP53I13Q8NBR0 393 aaPredicted RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 PLA2G15Q8NCC3 412 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 FAM46DQ8NEK8 389 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 OR2AP1Q8NGE2 309 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 CCL4L1Q8NHW4 92 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 FAM174AQ8TBP5 190 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 ENOX1Q8TC92 643 aaKnown RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 SLC20A1Q8WUM9 679 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 SCG3Q8WXD2 468 aaKnown RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 NAT6Q93015 286 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 NT5C3BQ969T7 300 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 FUBP1Q96AE4 644 aaKnown RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 VOPP1Q96AW1 172 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 PGAP3Q96FM1 320 aaPredicted RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 NCAPGQ9BPX3 1015 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 EDEM3Q9BZQ6 932 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 STRADBQ9C0K7 418 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 LRRN3Q9H3W5 708 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 MRPL40Q9NQ50 206 aaKnown RBP6.65□□□□□ -1.34
CD44-221ENST00000526000 TMEM59LQ9UK28 342 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 DAAM1Q9Y4D1 1078 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 LOXL2Q9Y4K0 774 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 PAXBP1Q9Y5B6 917 aa6.65□□□□□ -1.34
CD44-221ENST00000526000 COL6A6A6NMZ7 2263 aa6.65□□□□□ -1.35
CD44-221ENST00000526000 TP53BP1Q12888 1972 aaPredicted RBP6.64□□□□□ -1.35
CD44-221ENST00000526000 MGAQ8IWI9 3026 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 TRBV23OR9-2A0A075B6M9 112 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 TTC24A2A3L6 582 aaPredicted RBP6.64□□□□□ -1.35
CD44-221ENST00000526000 SMTNL1A8MU46 457 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 B4DGG1 531 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 KDELR3O43731 214 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 CREB3O43889 395 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 BUB1BO60566 1050 aaPredicted RBP6.64□□□□□ -1.35
CD44-221ENST00000526000 RAMP2O60895 175 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 TCEA3O75764 348 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 GFPT2O94808 682 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 CCL4P13236 92 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 RHOQP17081 205 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 MPSTP25325 297 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 ALDH4A1P30038 563 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 GABRB2P47870 512 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 PPM1FP49593 454 aaPredicted RBP6.64□□□□□ -1.35
CD44-221ENST00000526000 KLK7P49862 253 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 LIG3P49916 1009 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 HK3P52790 923 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 OR1D5P58170 312 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 RAD51Q06609 339 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 ARHGEF7Q14155 803 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 ELOCQ15369 112 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 TBR1Q16650 682 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 VWA3BQ502W6 1294 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 KLHDC7AQ5VTJ3 777 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 DENND2CQ68D51 928 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 SMYD5Q6GMV2 418 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 DPY19L2P1Q6NXN4 242 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 ZNF783Q6ZMS7 281 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 TMPRSS9Q7Z410 1059 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 CLEC14AQ86T13 490 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 NLRP14Q86W24 1093 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 GKN2Q86XP6 184 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 CAMK1DQ8IU85 385 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 ZDHHC17Q8IUH5 632 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 FAM114A1Q8IWE2 563 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 ARL10Q8N8L6 244 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 ASB12Q8WXK4 309 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 OR1E3Q8WZA6 343 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 RAB7BQ96AH8 199 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 ISG20Q96AZ6 181 aaKnown RBP6.64□□□□□ -1.35
CD44-221ENST00000526000 TBC1D31Q96DN5 1066 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 SGF29Q96ES7 293 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 HMCESQ96FZ2 354 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 CELF6Q96J87 481 aaKnown RBP6.64□□□□□ -1.35
CD44-221ENST00000526000 FAM81BQ96LP2 452 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 GDAP1L1Q96MZ0 367 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 C11orf70Q9BRQ4 267 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 FUCA2Q9BTY2 467 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 TTYH3Q9C0H2 523 aa6.64□□□□□ -1.35
CD44-221ENST00000526000 TMEM168Q9H0V1 697 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms