RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 RASA4BC9J798 803 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ERVH48-1M5A8F1 160 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FPGTO14772 594 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TPP1O14773 563 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CCP110O43303 1012 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RASA4O43374 803 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 B4GAT1O43505 415 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TNFSF15O95150 251 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 POP4O95707 220 aaKnown RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LSM8O95777 96 aaKnown RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PRKCSHP14314 528 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TCF4P15884 667 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ITIH1P19827 911 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PTPN9P43378 593 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 POLR2FP61218 127 aaKnown RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CYP4F2P78329 520 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 VAC14Q08AM6 782 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SERINC3Q13530 473 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 INPP5AQ14642 412 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KRT31Q15323 416 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TCP11X2Q5H9J9 407 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 E4F1Q66K89 784 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FOXR1Q6PIV2 292 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 GDPD4Q6W3E5 623 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZNF574Q6ZN55 896 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MON1BQ7L1V2 547 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TTC7BQ86TV6 843 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 NRROSQ86YC3 692 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ARHGAP12Q8IWW6 846 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SDR16C5Q8N3Y7 309 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RYBPQ8N488 228 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CCDC74AQ96AQ1 378 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CELF6Q96J87 481 aaKnown RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TTYH3Q9C0H2 523 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 VPS16Q9H269 839 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LRRC19Q9H756 370 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PCDH12Q9NPG4 1184 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 NLRC4Q9NPP4 1024 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 DYRK4Q9NR20 520 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FOXJ2Q9P0K8 574 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SIRPGQ9P1W8 387 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 APOBEC3BQ9UH17 382 aaKnown RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 STAP1Q9ULZ2 295 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PADI4Q9UM07 663 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PLEKHM1Q9Y4G2 1056 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PCDHGA8Q9Y5G5 932 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PCYT1BQ9Y5K3 369 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 DOPEY2Q9Y3R5 2298 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LRRK1Q38SD2 2015 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 EIF4E1BA6NMX2 242 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 BUB1O43683 1085 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RAMP2O60895 175 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PEX11BO96011 259 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 C6P13671 934 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TNFAIP3P21580 790 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SLC5A2P31639 672 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 UGT1A5P35504 534 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MAPKAPK2P49137 400 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LIG3P49916 1009 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 HK3P52790 923 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 UBE2HP62256 183 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZFP36L1Q07352 338 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SGCGQ13326 291 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 POLD3Q15054 466 aaPredicted RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 NR0B2Q15466 257 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CLEC16AQ2KHT3 1053 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 AFMIDQ63HM1 303 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 OGFOD3Q6PK18 319 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MACC1Q6ZN28 852 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RBM44Q6ZP01 1051 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 VASH2Q86V25 355 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZFAND4Q86XD8 727 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 DCP2Q8IU60 420 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 HID1Q8IV36 788 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CBARPQ8N350 705 aaPredicted RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 NPWQ8N729 165 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RTL3Q8N8U3 475 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TSEN2Q8NCE0 465 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 DENND6BQ8NEG7 585 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 GPR156Q8NFN8 814 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 NTAN1Q96AB6 310 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FAM81BQ96LP2 452 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PPP1R9BQ96SB3 815 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 APOOQ9BUR5 198 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 DUSP23Q9BVJ7 150 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SLC39A8Q9C0K1 460 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ABCG4Q9H172 646 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MAGEH1Q9H213 219 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FAM207AQ9NSI2 230 aaPredicted RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SPATS2LQ9NUQ6 558 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ETNK2Q9NVF9 386 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 DKK3Q9UBP4 350 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 GULP1Q9UBP9 304 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FZD10Q9ULW2 581 aa8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FARP1Q9Y4F1 1045 aaPredicted RBP8.35□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CSMD1Q96PZ7 3565 aa8.34□□□□□ -1.07
SCARNA20.3-201ENST00000516913 NEMP2A6NFY4 417 aa8.34□□□□□ -1.07
SCARNA20.3-201ENST00000516913 WASH4PA8MWX3 477 aa8.34□□□□□ -1.07
SCARNA20.3-201ENST00000516913 A8MX80 341 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms