RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 GGT7Q9UJ14 662 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 TPX2Q9ULW0 747 aaKnown RBP14.09□□□□□ -0.15
USP46-209ENST00000514536 EFR3BQ9Y2G0 817 aa14.09□□□□□ -0.15
USP46-209ENST00000514536 TSPAN11A1L157 253 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 PRR5-ARHGAP8B1AHC4 643 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 TRAFD1O14545 582 aaPredicted RBP14.08□□□□□ -0.16
USP46-209ENST00000514536 AREL1O15033 823 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 SLC31A1O15431 190 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 SPINT1O43278 529 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 TSPAN6O43657 245 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 FOXD2O60548 495 aaPredicted RBP14.08□□□□□ -0.16
USP46-209ENST00000514536 PRKCGP05129 697 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 HLA-DQB2P05538 268 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 PTPN7P35236 360 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 IFI35P80217 286 aaPredicted RBP14.08□□□□□ -0.16
USP46-209ENST00000514536 DSC2Q02487 901 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 LMNB2Q03252 620 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 ZBTB17Q13105 803 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 UGP2Q16851 508 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 ZNF284Q2VY69 593 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 BRAT1Q6PJG6 821 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 TFB1MQ8WVM0 346 aaKnown RBP14.08□□□□□ -0.16
USP46-209ENST00000514536 RMDN1Q96DB5 314 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 SERAC1Q96JX3 654 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 IL12RB2Q99665 862 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 CEP41Q9BYV8 373 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 POLR1EQ9GZS1 481 aaKnown RBP14.08□□□□□ -0.16
USP46-209ENST00000514536 CAPN10Q9HC96 672 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 AMACRQ9UHK6 382 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 ATP8A1Q9Y2Q0 1164 aa14.08□□□□□ -0.16
USP46-209ENST00000514536 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.07□□□□□ -0.16
USP46-209ENST00000514536 LNP1A1A4G5 178 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 UPK3BL1B0FP48 263 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 UPK3BL2E5RIL1 263 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 APOC4-APOC2K7ER74 178 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 WNT9AO14904 365 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 TJP3O95049 919 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 APOC2P02655 101 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 PRLRP16471 622 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 RPS21P63220 83 aaKnown RBP14.07□□□□□ -0.16
USP46-209ENST00000514536 SEMG2Q02383 582 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 NIPAL4Q0D2K0 466 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 TRAF2Q12933 501 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 PRKD1Q15139 912 aaPredicted RBP14.07□□□□□ -0.16
USP46-209ENST00000514536 SETMARQ53H47 684 aaPredicted RBP14.07□□□□□ -0.16
USP46-209ENST00000514536 RALGPS1Q5JS13 557 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 MEI1Q5TIA1 1274 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 ERMP1Q7Z2K6 904 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 CNTD1Q8N815 330 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 ARRDC2Q8TBH0 407 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 PDCD6IPQ8WUM4 868 aaKnown RBP14.07□□□□□ -0.16
USP46-209ENST00000514536 ECHDC3Q96DC8 303 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 SLC6A18Q96N87 628 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 ALS2CR12Q96Q35 445 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 PCDH12Q9NPG4 1184 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 AASDHPPTQ9NRN7 309 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 HAUS2Q9NVX0 235 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 CEP192Q8TEP8 1941 aa14.07□□□□□ -0.16
USP46-209ENST00000514536 A0A1B0GVT2 93 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 IGLON5A6NGN9 336 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 H7C0C1 242 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 HTRA2O43464 458 aaPredicted RBP14.06□□□□□ -0.16
USP46-209ENST00000514536 MMP20O60882 483 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 ENGP17813 658 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 CES1P23141 567 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 NUDT1P36639 197 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 ATP5OP48047 213 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 SUOXP51687 545 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 AFF3P51826 1226 aaKnown RBP14.06□□□□□ -0.16
USP46-209ENST00000514536 RACK1P63244 317 aaKnown RBP14.06□□□□□ -0.16
USP46-209ENST00000514536 FAM193AP78312 1265 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 IHHQ14623 411 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 RPS6KA1Q15418 735 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 TEAD4Q15561 434 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 TMEM259Q4ZIN3 620 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 ALG1LQ6GMV1 187 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 KIAA1161Q6NSJ0 714 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 LAYNQ6UX15 382 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 ACTL9Q8TC94 416 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 UBE2Q2Q8WVN8 375 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 AGAP3Q96P47 875 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 MYOCQ99972 504 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 FAM118BQ9BPY3 351 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 GTPBP2Q9BX10 602 aaKnown RBP14.06□□□□□ -0.16
USP46-209ENST00000514536 SLC17A9Q9BYT1 436 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 C10orf88Q9H8K7 445 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 DMTF1Q9Y222 760 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 CA5BQ9Y2D0 317 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 PCDHB9Q9Y5E1 797 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 RAI2Q9Y5P3 530 aa14.06□□□□□ -0.16
USP46-209ENST00000514536 HACD1B0YJ81 288 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 PRAMEF26H0Y7S4 382 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 ARHGAP33O14559 1287 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 RIOK3O14730 519 aaKnown RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 SOCS5O75159 536 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 PAK4O96013 591 aaPredicted RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 POLR2LP62875 67 aaKnown RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 ARHGAP8P85298 464 aa14.05□□□□□ -0.16
USP46-209ENST00000514536 OTUD4Q01804 1114 aaKnown RBP14.05□□□□□ -0.16
USP46-209ENST00000514536 ELP6Q0PNE2 266 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms