RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ZNF846Q147U1 533 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SYTL3Q4VX76 610 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 GJC2Q5T442 439 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CRTC3Q6UUV7 619 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 LDB1Q86U70 411 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 UNC93AQ86WB7 457 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CLYBLQ8N0X4 340 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 FSTL5Q8N475 847 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ZNF540Q8NDQ6 660 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SH3KBP1Q96B97 665 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ASB2Q96Q27 587 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 P2RX7Q99572 595 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ZFP14Q9HCL3 533 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SCUBE2Q9NQ36 999 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SNX8Q9Y5X2 465 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ZNF541Q9H0D2 1346 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 FER1L4A9Z1Z3 1794 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 RGPD2P0DJD1 1756 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 PDLIM1O00151 329 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ABCB1P08183 1280 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 NMBRP28336 390 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CLCN5P51795 746 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 HPCAP84074 193 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 KCNJ11Q14654 390 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 PKN3Q6P5Z2 889 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 KCTD8Q6ZWB6 473 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 GPSM1Q86YR5 675 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 AHI1Q8N157 1196 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 GPRC5AQ8NFJ5 357 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CLEC4DQ8WXI8 215 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 C19orf60Q96EN9 201 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ADI1Q9BV57 179 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ADAMTS6Q9UKP5 1117 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 MED1Q15648 1581 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 DYTNA2CJ06 578 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 TOR1BO14657 336 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 KLF11O14901 512 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 RAMP2O60895 175 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SH3BGRLO75368 114 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SERPIND1P05546 499 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 HARS2P49590 506 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 RELL1Q8IUW5 271 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 DRAXINQ8NBI3 349 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 FBXO32Q969P5 355 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 HDAC10Q969S8 669 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 DTLQ9NZJ0 730 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 C3orf18Q9UK00 162 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CDH9Q9ULB4 789 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 DUSP12Q9UNI6 340 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CBX4O00257 560 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 FFAR3O14843 346 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 GPR42O15529 346 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 IPO13O94829 963 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 KCNH1O95259 989 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 POMCP01189 267 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 YAP1P46937 504 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 IDH2P48735 452 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CYP4F2P78329 520 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CYP4F3Q08477 520 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 KRT33BQ14525 404 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 FAM45BPQ6NSW5 357 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ANKRD23Q86SG2 305 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 DENND6AQ8IWF6 608 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 DCP1BQ8IZD4 617 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 NIPA2Q8N8Q9 360 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 FBXO27Q8NI29 283 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 STAG3L4Q8TBR4 150 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SEPT8Q92599 483 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ZHX1-C8orf76Q96EF9 292 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 PPM1MQ96MI6 270 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 NTPCRQ9BSD7 190 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 TMEM245Q9H330 911 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ARHGEF4Q9NR80 690 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 NEMP2A6NFY4 417 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 F5H5T6 163 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ARF4P18085 180 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 MZF1P28698 734 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 OR1E1P30953 314 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 FKBP1AP62942 108 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 AARS2Q5JTZ9 985 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 NT5DC4Q86YG4 428 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 DCBLD1Q8N8Z6 715 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 CMASQ8NFW8 434 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SPATA22Q8NHS9 363 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 C18orf25Q96B23 403 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SMARCD1Q96GM5 515 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 COQ7Q99807 217 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SLC39A3Q9BRY0 314 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 C1orf21Q9H246 121 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 PRDM5Q9NQX1 630 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SMPD3Q9NY59 655 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 TMEM233B4DJY2 109 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 GM2AP17900 193 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 ASPAP45381 313 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SEPHS1P49903 392 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 NRG1Q02297 640 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SLC25A11Q02978 314 aaKnown RBP7.8□□□□□ -1.16
CLCN3-209ENST00000513761 SLC25A52Q3SY17 297 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 PLEKHG4Q58EX7 1191 aa7.8□□□□□ -1.16
CLCN3-209ENST00000513761 GLT6D1Q7Z4J2 308 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms