RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 FLRT2O43155 660 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 COMTP21964 271 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 CCNCP24863 283 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 GARSP41250 739 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 NOP2P46087 812 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 CCT8P50990 548 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 GBE1Q04446 702 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 BCL2L1Q07817 233 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 SPA17Q15506 151 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 GCNT7Q6ZNI0 430 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 GLRX5Q86SX6 157 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 SLCO6A1Q86UG4 719 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 OR13H1Q8NG92 308 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 BAHD1Q8TBE0 780 aaPredicted RBP16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 ATP13A3Q9H7F0 1226 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 NOD2Q9HC29 1040 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 PCDH12Q9NPG4 1184 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 HYOU1Q9Y4L1 999 aa16.28■□□□□ 0.2
PDLIM5-212ENST00000509333 KNTC1P50748 2209 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 RCCD1A6NED2 376 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 MATN3O15232 486 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 HTRA2O43464 458 aaPredicted RBP16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 MFSD11O43934 449 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 TM7SF2O76062 418 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 NDUFA10O95299 355 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 CYLC1P35663 651 aaPredicted RBP16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 AP1S1P61966 158 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 POLR2LP62875 67 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 IL9RQ01113 521 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 IHHQ14623 411 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 RAD9BQ6WBX8 426 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 KANSL1Q7Z3B3 1105 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 VSIG1Q86XK7 387 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 GATAD2AQ86YP4 633 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 DCP2Q8IU60 420 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 RHOT1Q8IXI2 618 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 ATPAF2Q8N5M1 289 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 SPOCK2Q92563 424 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 MAML1Q92585 1016 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 FATE1Q969F0 183 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 NUDCD1Q96RS6 583 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 MGME1Q9BQP7 344 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 GPR27Q9NS67 375 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 SALL4Q9UJQ4 1053 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
PDLIM5-212ENST00000509333 TMEM131Q92545 1883 aa16.27■□□□□ 0.19
PDLIM5-212ENST00000509333 A0A0A6YYK5 440 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 LRRD1A4D1F6 860 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 CFAP69A5D8W1 941 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 SOWAHDA6NJG2 315 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 MAP3K6O95382 1288 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 TOP3BO95985 862 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 XPAP23025 273 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 SERPINA4P29622 427 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 MMP13P45452 471 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 ARRB1P49407 418 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 MAXP61244 160 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 SHC2P98077 582 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 SEMG2Q02383 582 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 ELP6Q0PNE2 266 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 TAZQ16635 292 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 IFI16Q16666 785 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 RALGPS1Q5JS13 557 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 SLC9A4Q6AI14 798 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 SLC22A18ASQ8N1D0 253 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 CBARPQ8N350 705 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 SLC25A45Q8N413 288 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 OXR1Q8N573 874 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 PLD5Q8N7P1 536 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 CXorf40AQ8TE69 158 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 LRRN4Q8WUT4 740 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 RNF25Q96BH1 459 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 CDC6Q99741 560 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 WRAP53Q9BUR4 548 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 DTLQ9NZJ0 730 aa16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 REXO2Q9Y3B8 237 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-212ENST00000509333 FPGTO14772 594 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 YKT6O15498 198 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 PRKCGP05129 697 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 ITGAVP06756 1048 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 TNNT1P13805 278 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 GRK6P43250 576 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 LIG3P49916 1009 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 PFN3P60673 137 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 ZNF235Q14590 738 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 MFSD7Q6UXD7 560 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 BBS5Q8N3I7 341 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 DENND6BQ8NEG7 585 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 IFT43Q96FT9 208 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 MAK16Q9BXY0 300 aaKnown RBP16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 GOLPH3Q9H4A6 298 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 CAAP1Q9H8G2 361 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 NT5MQ9NPB1 228 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 MBNL1Q9NR56 388 aaKnown RBP16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 RBM22Q9NW64 420 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms