RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 SPINT1O43278 529 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 DAPK3O43293 454 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 CTSEP14091 401 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 TIMP2P16035 220 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 FERP16591 822 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 EIF4A3P38919 411 aaKnown RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 ZNF143P52747 638 aaPredicted RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 TPI1P60174 286 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 PFN3P60673 137 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 RPL7AP62424 266 aaKnown RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 YPEL5P62699 121 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 CXADRP78310 365 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 MYL5Q02045 173 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 EIF2B5Q13144 721 aaKnown RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 TCEA2Q15560 299 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 STX1AQ16623 288 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 KLHL40Q2TBA0 621 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 INO80DQ53TQ3 878 aaPredicted RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 BROXQ5VW32 411 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 ESRP1Q6NXG1 681 aaKnown RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 GUSBP11Q6P575 273 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 RD3Q7Z3Z2 195 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 PHACTR4Q8IZ21 702 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 RBFAQ8N0V3 343 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 LSMEM2Q8N112 164 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 ZNF248Q8NDW4 579 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 SNIP1Q8TAD8 396 aaKnown RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 SCG3Q8WXD2 468 aaKnown RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 ASB12Q8WXK4 309 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 GBP4Q96PP9 640 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 CNPY3Q9BT09 278 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 KLC2Q9H0B6 622 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 DONSONQ9NYP3 566 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 GULP1Q9UBP9 304 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 UBA2Q9UBT2 640 aaPredicted RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 LIMA1Q9UHB6 759 aaKnown RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 SALL4Q9UJQ4 1053 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 FZD10Q9ULW2 581 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 COQ6Q9Y2Z9 468 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 LRRK1Q38SD2 2015 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 KALRNO60229 2985 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 ANKRD36A6QL64 1941 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 AREL1O15033 823 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 INSIG1O15503 277 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 LZTS3O60299 673 aaPredicted RBP10.84□□□□□ -0.67
SNCA-207ENST00000502987 PIGNO95427 931 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 TGM2P21980 687 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 RBMS1P29558 406 aaKnown RBP10.84□□□□□ -0.67
SNCA-207ENST00000502987 IGFALSP35858 605 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 AIF1P55008 147 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 PCBP4P57723 403 aaKnown RBP10.84□□□□□ -0.67
SNCA-207ENST00000502987 PPARDQ03181 441 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 ELP6Q0PNE2 266 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 SERINC3Q13530 473 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 LRRC14Q15048 493 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 PARP15Q460N3 678 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 C3orf38Q5JPI3 329 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 TPRG1LQ5T0D9 272 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 CDCP2Q5VXM1 449 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 ACAD10Q6JQN1 1059 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 MON1BQ7L1V2 547 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 GPR155Q7Z3F1 870 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 HID1Q8IV36 788 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 SPACA3Q8IXA5 215 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 TPCN2Q8NHX9 752 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 CENPTQ96BT3 561 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 ZNF578Q96N58 590 aaPredicted RBP10.84□□□□□ -0.67
SNCA-207ENST00000502987 TCEAL2Q9H3H9 227 aaPredicted RBP10.84□□□□□ -0.67
SNCA-207ENST00000502987 SUV39H2Q9H5I1 410 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 DHX35Q9H5Z1 703 aaKnown RBP10.84□□□□□ -0.67
SNCA-207ENST00000502987 PRORYQ9H606 182 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 NOL6Q9H6R4 1146 aaKnown RBP10.84□□□□□ -0.67
SNCA-207ENST00000502987 POLR1BQ9H9Y6 1135 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 MBNL1Q9NR56 388 aaKnown RBP10.84□□□□□ -0.67
SNCA-207ENST00000502987 GPR27Q9NS67 375 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 GPATCH2LQ9NWQ4 482 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 DKK3Q9UBP4 350 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 RP1P56715 2156 aa10.84□□□□□ -0.67
SNCA-207ENST00000502987 LY6G6EA0A0G2JKS1 128 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 ARHGAP42A6NI28 874 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 TMEM110-MUSTN1A8MSY1 372 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 J3KR12 359 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 EEF2KO00418 725 aaKnown RBP10.83□□□□□ -0.68
SNCA-207ENST00000502987 TPP1O14773 563 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 FGF10O15520 208 aaPredicted RBP10.83□□□□□ -0.68
SNCA-207ENST00000502987 GCATO75600 419 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 TSHRP16473 764 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 PSMA2P25787 234 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 HTR1BP28222 390 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 LSSP48449 732 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 BLKP51451 505 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 GSCP56915 257 aaPredicted RBP10.83□□□□□ -0.68
SNCA-207ENST00000502987 C19orf57Q0VDD7 668 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 GRM3Q14832 879 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 ELOCQ15369 112 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 CYTH1Q15438 398 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 ISXQ2M1V0 245 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 ERAP2Q6P179 960 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 ENPP7Q6UWV6 458 aa10.83□□□□□ -0.68
SNCA-207ENST00000502987 RBM44Q6ZP01 1051 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms