RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ZNF542PQ5EBM4 170 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TCP11X2Q5H9J9 407 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 C3orf38Q5JPI3 329 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TPRG1LQ5T0D9 272 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TMCO4Q5TGY1 634 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 FAM72AQ5TYM5 149 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 FAM72DQ6L9T8 149 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 SLFN11Q7Z7L1 901 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 FAM72BQ86X60 149 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 GKN2Q86XP6 184 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 DNAAF5Q86Y56 855 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 RAVER1Q8IY67 606 aaKnown RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 DRC7Q8IY82 874 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 GPR156Q8NFN8 814 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 ENOX1Q8TC92 643 aaKnown RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 LMX1AQ8TE12 382 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 CXorf40AQ8TE69 158 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 RXFP2Q8WXD0 754 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 CPA5Q8WXQ8 436 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 ECHDC3Q96DC8 303 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 ATXN7L3BQ96GX2 97 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 KLHL32Q96NJ5 620 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TMEM74Q96NL1 305 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 CCNL2Q96S94 520 aaPredicted RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 EPAS1Q99814 870 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 MYOCQ99972 504 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 CCDC3Q9BQI4 270 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TM6SF2Q9BZW4 377 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 STRADBQ9C0K7 418 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 NOL6Q9H6R4 1146 aaKnown RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 CATSPERBQ9H7T0 1116 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 PDFQ9HBH1 243 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 METTL5Q9NRN9 209 aaKnown RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TMPRSS4Q9NRS4 437 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 PNMA8BQ9ULN7 279 aaPredicted RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 UNC13CQ8NB66 2214 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 CFAP46Q8IYW2 2715 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CPED1A4D0V7 1026 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 LRRC10BA6NIK2 292 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 D6RAR5 112 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 GOLGA8SH3BPF8 625 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ZW10O43264 779 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 BUB1O43683 1085 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 PNMA6AP0CW24 399 aaPredicted RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 LIPCP11150 499 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 TIMP2P16035 220 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CHRNB2P17787 502 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 GPD1P21695 349 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 KELP23276 732 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 TEAD1P28347 426 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 RFC1P35251 1148 aaPredicted RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 STAT1P42224 750 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 NSFP46459 744 aaKnown RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 HCAR3P49019 387 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 NUMBP49757 651 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ZNF143P52747 638 aaPredicted RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 POLR2LP62875 67 aaKnown RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ATP11AP98196 1134 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ZFP36L1Q07352 338 aaKnown RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CLN3Q13286 438 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 SQSTM1Q13501 440 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 PEX6Q13608 980 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CAMK4Q16566 473 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 TSR1Q2NL82 804 aaKnown RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 C15orf59Q2T9L4 293 aaPredicted RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 KLHL40Q2TBA0 621 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 DEFB133Q30KQ1 61 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 DPCR1Q3MIW9 517 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 EFHC2Q5JST6 749 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 PERM1Q5SV97 790 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 PPP1R15BQ5SWA1 713 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ARHGAP40Q5TG30 622 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 FAXCQ5TGI0 409 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CDKAL1Q5VV42 579 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 NAA35Q5VZE5 725 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 AFMIDQ63HM1 303 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 RWDD4Q6NW29 188 aaKnown RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ERAP2Q6P179 960 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 WDR59Q6PJI9 974 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CCDC81Q6ZN84 652 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CLEC17AQ6ZS10 378 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ZNF438Q7Z4V0 828 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 C17orf82Q86X59 251 aaPredicted RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 DTX1Q86Y01 620 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CREBRFQ8IUR6 639 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 PSTKQ8IV42 348 aaKnown RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 RBFAQ8N0V3 343 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 EMC1Q8N766 993 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 GPT2Q8TD30 523 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 FAM172AQ8WUF8 416 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 COL26A1Q96A83 441 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 HMCESQ96FZ2 354 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 APOOQ9BUR5 198 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 GANQ9H2C0 597 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CLSTN2Q9H4D0 955 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 SUV39H2Q9H5I1 410 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 LRRC19Q9H756 370 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 CPNE5Q9HCH3 593 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 MBNL1Q9NR56 388 aaKnown RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 DNAI1Q9UI46 699 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms