RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 WASH4PA8MWX3 477 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 TPP1O14773 563 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 ATXN7O15265 892 aaPredicted RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 CREB3O43889 395 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 TM7SF2O76062 418 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 DXOO77932 396 aaKnown RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 CALB1P05937 261 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 LSSP48449 732 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 ADKP55263 362 aaKnown RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 RHOAP61586 193 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 NR1I3Q14994 352 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 INO80DQ53TQ3 878 aaPredicted RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 PRRT3Q5FWE3 981 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 ZSWIM9Q86XI8 627 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 ANP32BQ92688 251 aaKnown RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 PRR11Q96HE9 360 aaPredicted RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 NAP1L5Q96NT1 182 aaPredicted RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 ERGIC2Q96RQ1 377 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 EPAS1Q99814 870 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 XPO4Q9C0E2 1151 aaKnown RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 ABCG4Q9H172 646 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 POLR1BQ9H9Y6 1135 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 PDFQ9HBH1 243 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 SEPT11Q9NVA2 429 aaKnown RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 GPATCH2LQ9NWQ4 482 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 TAS2R14Q9NYV8 317 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 DKK3Q9UBP4 350 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 APOBEC3BQ9UH17 382 aaKnown RBP18.74■□□□□ 0.59
PRKCB-209ENST00000498058 DAAM1Q9Y4D1 1078 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 ENTPD2Q9Y5L3 495 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 KALRNO60229 2985 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 J3KR12 359 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 MUSKO15146 869 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 BUB1BO60566 1050 aaPredicted RBP18.73■□□□□ 0.59
PRKCB-209ENST00000498058 IGSF6O95976 241 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 EIF4A3P38919 411 aaKnown RBP18.73■□□□□ 0.59
PRKCB-209ENST00000498058 YBEYP58557 167 aaPredicted RBP18.73■□□□□ 0.59
PRKCB-209ENST00000498058 IRF4Q15306 451 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 CA9Q16790 459 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 TMEM52BQ4KMG9 183 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 EFHC2Q5JST6 749 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 KCTD16Q68DU8 428 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 DNAJC24Q6P3W2 148 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 DNAAF5Q86Y56 855 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 UMODL1-AS1Q8N2C9 162 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 NEK11Q8NG66 645 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 CXorf40AQ8TE69 158 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 ATXN7L3BQ96GX2 97 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 ZNF578Q96N58 590 aaPredicted RBP18.73■□□□□ 0.59
PRKCB-209ENST00000498058 IL12RB2Q99665 862 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 SYT11Q9BT88 431 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 LRRC19Q9H756 370 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 SPASTQ9UBP0 616 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 SATB2Q9UPW6 733 aa18.73■□□□□ 0.59
PRKCB-209ENST00000498058 ATMQ13315 3056 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 EIF4E1BA6NMX2 242 aaKnown RBP18.72■□□□□ 0.59
PRKCB-209ENST00000498058 YY2O15391 372 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 PRKCGP05129 697 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 TSHRP16473 764 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 RGRP47804 291 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 THOP1P52888 689 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 PDX1P52945 283 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 CXADRP78310 365 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 NR0B2Q15466 257 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 WSCD2Q2TBF2 565 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 C3orf38Q5JPI3 329 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 GPR155Q7Z3F1 870 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 MCOLN2Q8IZK6 566 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 ARFGAP1Q8N6T3 406 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 ZNF248Q8NDW4 579 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 BTN2A2Q8WVV5 523 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 CASKIN2Q8WXE0 1202 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 ARHGEF26Q96DR7 871 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 IQCDQ96DY2 449 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 NSMCE3Q96MG7 304 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 LGMNQ99538 433 aa18.72■□□□□ 0.59
PRKCB-209ENST00000498058 CPEB1Q9BZB8 566 aaKnown RBP18.72■□□□□ 0.59
PRKCB-209ENST00000498058 TSPAN11A1L157 253 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 LMO7DNF2Z398 122 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 TEX33O43247 280 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 PCBP4P57723 403 aaKnown RBP18.71■□□□□ 0.59
PRKCB-209ENST00000498058 YPEL5P62699 121 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 RAD51Q06609 339 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 PTK2BQ14289 1009 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 TCEA2Q15560 299 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 C6orf132Q5T0Z8 1188 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 FAXCQ5TGI0 409 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 ACAD10Q6JQN1 1059 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 MACC1Q6ZN28 852 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 IRF2BP2Q7Z5L9 587 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 TSACCQ96A04 125 aaPredicted RBP18.71■□□□□ 0.59
PRKCB-209ENST00000498058 FUBP1Q96AE4 644 aaKnown RBP18.71■□□□□ 0.59
PRKCB-209ENST00000498058 MRFAP1L1Q96HT8 127 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 CELF6Q96J87 481 aaKnown RBP18.71■□□□□ 0.59
PRKCB-209ENST00000498058 VCPIP1Q96JH7 1222 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 CNPY3Q9BT09 278 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 SLC39A8Q9C0K1 460 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 CPNE5Q9HCH3 593 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 PCDH12Q9NPG4 1184 aa18.71■□□□□ 0.59
PRKCB-209ENST00000498058 RABGEF1Q9UJ41 708 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms