RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 FAM72DQ6L9T8 149 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 ERAP2Q6P179 960 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 USP53Q70EK8 1073 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 RAB11FIP2Q7L804 512 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 FAM72BQ86X60 149 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 GKN2Q86XP6 184 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 FSTL5Q8N475 847 aaPredicted RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 ARL10Q8N8L6 244 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 JOSD2Q8TAC2 188 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 WDR48Q8TAF3 677 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 EPS8L1Q8TE68 723 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 COL26A1Q96A83 441 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 CENPTQ96BT3 561 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 GRAMD1AQ96CP6 724 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 PRR11Q96HE9 360 aaPredicted RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 CCNL2Q96S94 520 aaPredicted RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 BOCQ9BWV1 1114 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 STK33Q9BYT3 514 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 MAGEB5Q9BZ81 275 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 TTYH3Q9C0H2 523 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 CLPBQ9H078 707 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 NLRC4Q9NPP4 1024 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 FAM207AQ9NSI2 230 aaPredicted RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 OR1A2Q9Y585 309 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 PCDHGA8Q9Y5G5 932 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 COL27A1Q8IZC6 1860 aaPredicted RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 TENM4Q6N022 2769 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 MYO18BQ8IUG5 2567 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 ZSCAN5CA6NGD5 496 aaPredicted RBP9.73□□□□□ -0.85
UBR4-216ENST00000494503 B4DGG1 531 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 B8ZZF3 427 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 K7ENP7 123 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 INSIG1O15503 277 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 KDELR3O43731 214 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 PRKCGP05129 697 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 ITGA2BP08514 1039 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 KRT3P12035 628 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 DESP17661 470 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 GPD1P21695 349 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 KLK7P49862 253 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 HK3P52790 923 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 INHBCP55103 352 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 POLR2FP61218 127 aaKnown RBP9.73□□□□□ -0.85
UBR4-216ENST00000494503 CCL7P80098 99 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 CDR2Q01850 454 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 ELP6Q0PNE2 266 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 NFATC3Q12968 1075 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 CLN3Q13286 438 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 BIRC2Q13490 618 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 FKBP15Q5T1M5 1219 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 PHF19Q5T6S3 580 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 INO80CQ6PI98 192 aaPredicted RBP9.73□□□□□ -0.85
UBR4-216ENST00000494503 TAF8Q7Z7C8 310 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 SLFN11Q7Z7L1 901 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 B3GNT8Q7Z7M8 397 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 NLRP14Q86W24 1093 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 PLPP6Q8IY26 295 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 PYROXD2Q8N2H3 581 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 ATL2Q8NHH9 583 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 ASB12Q8WXK4 309 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 HMCESQ96FZ2 354 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 MED8Q96G25 268 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 EDEM3Q9BZQ6 932 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 TRIM4Q9C037 500 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 VPS16Q9H269 839 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 SAMSN1Q9NSI8 373 aaKnown RBP9.73□□□□□ -0.85
UBR4-216ENST00000494503 ADAM22Q9P0K1 906 aa9.73□□□□□ -0.85
UBR4-216ENST00000494503 UBA2Q9UBT2 640 aaPredicted RBP9.73□□□□□ -0.85
UBR4-216ENST00000494503 PNMA8BQ9ULN7 279 aaPredicted RBP9.73□□□□□ -0.85
UBR4-216ENST00000494503 LRP4O75096 1905 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 C2CD4BA6NLJ0 364 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 CDRT15L2A8MXV6 281 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 RASA4BC9J798 803 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 D6RAR5 112 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 AREL1O15033 823 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 RASA4O43374 803 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 TNFP01375 233 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 TIMP2P16035 220 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 MMP8P22894 467 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 SLC5A2P31639 672 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 PDX1P52945 283 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 MAPK10P53779 464 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 HDAC4P56524 1084 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 SRP54P61011 504 aaKnown RBP9.72□□□□□ -0.85
UBR4-216ENST00000494503 ARHGEF7Q14155 803 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 INPP5AQ14642 412 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 NFATC4Q14934 902 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 TGIF1Q15583 401 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 ALG11Q2TAA5 492 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 MAP9Q49MG5 647 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 MANEALQ5VSG8 457 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 DNAJC24Q6P3W2 148 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 STRADAQ7RTN6 431 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 ZNF677Q86XU0 584 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 DNAAF5Q86Y56 855 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 CCNJLQ8IV13 435 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 RTL3Q8N8U3 475 aaKnown RBP9.72□□□□□ -0.85
UBR4-216ENST00000494503 TP53I13Q8NBR0 393 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms