RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	B3GALNT2	Q8NCR0	500 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	SPPL2B	Q8TCT7	592 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	GRK7	Q8WTQ7	553 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	HSPBAP1	Q96EW2	488 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	EXOC2	Q96KP1	924 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ADAM7	Q9H2U9	754 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	CYP3A43	Q9HB55	503 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	SYTL2	Q9HCH5	934 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	CRTAC1	Q9NQ79	661 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	INTS7	Q9NVH2	962 aa	Known RBP	11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	STOML1	Q9UBI4	398 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	PCOLCE2	Q9UKZ9	415 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	POM121C	A8CG34	1229 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	SGK1	O00141	431 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	PMM2	O15305	246 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	XYLB	O75191	536 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	JRK	O75564	520 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	C1R	P00736	705 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	CAPN1	P07384	714 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	PIM1	P11309	404 aa	Predicted RBP	11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	SELL	P14151	372 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	EPB42	P16452	691 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	SLC9A3	P48764	834 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	RAB14	P61106	215 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	PTK2	Q05397	1052 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	NNT	Q13423	1086 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	SMU1	Q2TAY7	513 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	CYP27C1	Q4G0S4	372 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	AARD	Q4LEZ3	155 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	MZT2B	Q6NZ67	158 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	C4orf50	Q6ZRC1	276 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	PRR23C	Q6ZRP0	262 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	RRAGA	Q7L523	313 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ACOT1	Q86TX2	421 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ARHGEF19	Q8IW93	802 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	OR52K1	Q8NGK4	314 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	UCMA	Q8WVF2	138 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	SLC44A1	Q8WWI5	657 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ZNF707	Q96C28	371 aa	Predicted RBP	11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	PCED1B	Q96HM7	432 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	RIPOR3	Q96MK2	946 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	TWNK	Q96RR1	684 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	SLC13A1	Q9BZW2	595 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	RAB17	Q9H0T7	212 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	S1PR5	Q9H228	398 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ARHGEF3	Q9NR81	526 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	FAM114A2	Q9NRY5	505 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	CISH	Q9NSE2	258 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	FAM49B	Q9NUQ9	324 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	FAM50B	Q9Y247	325 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	PCDHGA10	Q9Y5H3	936 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	OR5K3	A6NET4	321 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919		H0Y626	953 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	PI15	O43692	258 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	SCO2	O43819	266 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	SSX5	O60225	188 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	SIN3B	O75182	1162 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	CILP	O75339	1184 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	ESRRB	O95718	433 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	TPBGL	P0DKB5	382 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	PTPN1	P18031	435 aa	Known RBP	11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	SLC9A1	P19634	815 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	CTNNA2	P26232	953 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	ALDH1A3	P47895	512 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	IFNAR2	P48551	515 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	SULT1E1	P49888	294 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	PRAME	P78395	509 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	GFPT1	Q06210	699 aa	Predicted RBP	11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	INCA1	Q0VD86	236 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	CBX2	Q14781	532 aa	Predicted RBP	11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	NCF4	Q15080	339 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	TSC22D1	Q15714	1073 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	PLA2G4E	Q3MJ16	856 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	GPR149	Q86SP6	731 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	SCN4B	Q8IWT1	228 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	CMAS	Q8NFW8	434 aa	Predicted RBP	11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	LMO3	Q8TAP4	145 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	GANC	Q8TET4	914 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	C2orf15	Q8WU43	125 aa	Known RBP	11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	KAT5	Q92993	513 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	DACT3	Q96B18	629 aa	Predicted RBP	11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	CHFR	Q96EP1	664 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	RMND5B	Q96G75	393 aa	Predicted RBP	11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	ASB2	Q96Q27	587 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	PKMYT1	Q99640	499 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	MED10	Q9BTT4	135 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	NT5C1A	Q9BXI3	368 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	PRKD2	Q9BZL6	878 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	RNF38	Q9H0F5	515 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	HSD3B7	Q9H2F3	369 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	OR51B5	Q9H339	312 aa		11.71	□□□□□ -0.53
BRCA1-222	ENST00000493919	CLDN5	O00501	218 aa		11.7	□□□□□ -0.54
BRCA1-222	ENST00000493919	AQP9	O43315	295 aa		11.7	□□□□□ -0.54
BRCA1-222	ENST00000493919	RSL1D1	O76021	490 aa	Known RBP	11.7	□□□□□ -0.54
BRCA1-222	ENST00000493919	CCDC130	P13994	396 aa		11.7	□□□□□ -0.54
BRCA1-222	ENST00000493919	ZNF18	P17022	549 aa		11.7	□□□□□ -0.54
BRCA1-222	ENST00000493919	JAK1	P23458	1154 aa		11.7	□□□□□ -0.54
BRCA1-222	ENST00000493919	CYP2F1	P24903	491 aa		11.7	□□□□□ -0.54

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