RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-223	ENST00000493695	CDKN1A	P38936	164 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	PTPN9	P43378	593 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	PNLIPRP1	P54315	467 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	TRIM14	Q14142	442 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	IL13RA2	Q14627	380 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	SYT16	Q17RD7	645 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	CCDC38	Q502W7	563 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	CCDC174	Q6PII3	467 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	RRAGA	Q7L523	313 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	SHF	Q7M4L6	423 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	MON1A	Q86VX9	555 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	EXOC8	Q8IYI6	725 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	GHDC	Q8N2G8	530 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	DMBX1	Q8NFW5	382 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	GRAPL	Q8TC17	118 aa	Predicted RBP	4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	RNF183	Q96D59	192 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	HERPUD2	Q9BSE4	406 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	NLK	Q9UBE8	527 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	SLC9A2	Q9UBY0	812 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	SIX4	Q9UIU6	781 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	KCND3	Q9UK17	655 aa		4.24	□□□□□ -1.73
SMC4-223	ENST00000493695	GAGE7	O76087	117 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	GAGE12F	P0CL80	117 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	GAGE12G	P0CL81	117 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	GAGE12I	P0CL82	117 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	CHKA	P35790	457 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	CDK7	P50613	346 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	AP2B1	P63010	937 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	GAGE1	Q13065	139 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	GAGE4	Q13068	117 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	BYSL	Q13895	437 aa	Known RBP	4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	PDCD2	Q16342	344 aa	Predicted RBP	4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	DGAT2L7P	Q6IED9	249 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	C19orf48	Q6RUI8	117 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	RINL	Q6ZS11	566 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	ZC3HC1	Q86WB0	502 aa	Known RBP	4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	LURAP1L	Q8IV03	231 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	DENND6A	Q8IWF6	608 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	ARRDC2	Q8TBH0	407 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	CREB3L4	Q8TEY5	395 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	TMEM19	Q96HH6	336 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	YME1L1	Q96TA2	773 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	ISCA1	Q9BUE6	129 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	EBF2	Q9HAK2	575 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	NOX4	Q9NPH5	578 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	PRDM8	Q9NQV8	689 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	DACT1	Q9NYF0	836 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	ZNF224	Q9NZL3	707 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	TAAR2	Q9P1P5	351 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	ZNF711	Q9Y462	761 aa		4.23	□□□□□ -1.73
SMC4-223	ENST00000493695	hCG_1642624	A0A1W2PR95	340 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	HBP1	O60381	514 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	NBN	O60934	754 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	ATP2C2	O75185	946 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	PRSS1	P07477	247 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	ACP5	P13686	325 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	PIGA	P37287	484 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	HAL	P42357	657 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	ARHGAP8	P85298	464 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	FCN2	Q15485	313 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	ME3	Q16798	604 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	FAM69B	Q5VUD6	431 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	CES5A	Q6NT32	575 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	ATG16L2	Q8NAA4	619 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	OR4N2	Q8NGD1	307 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	SCAMP5	Q8TAC9	235 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	TRAPPC12	Q8WVT3	735 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	TANK	Q92844	425 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	BARHL1	Q9BZE3	327 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	MYH16	Q9H6N6	1097 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	ZNF696	Q9H7X3	374 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	GRHPR	Q9UBQ7	328 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	FBXO40	Q9UH90	709 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	SLCO3A1	Q9UIG8	710 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	POU2F3	Q9UKI9	436 aa		4.22	□□□□□ -1.73
SMC4-223	ENST00000493695	TYW5	A2RUC4	315 aa	Known RBP	4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	FAM155B	O75949	473 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	CTPS1	P17812	591 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	FMO5	P49326	533 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	HSD17B4	P51659	736 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	FUT6	P51993	359 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	LINC01547	P58512	204 aa	Predicted RBP	4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	SREBF2	Q12772	1141 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	SLC1A5	Q15758	541 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	GORAB	Q5T7V8	394 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	CCDC129	Q6ZRS4	1044 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	CIART	Q8N365	385 aa	Predicted RBP	4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	ZNF248	Q8NDW4	579 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	DNAAF1	Q8NEP3	725 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	TRAPPC9	Q96Q05	1148 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	PABPC3	Q9H361	631 aa	Known RBP	4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	ABCF3	Q9NUQ8	709 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	TMLHE	Q9NVH6	421 aa		4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.21	□□□□□ -1.74
SMC4-223	ENST00000493695	IPO5	O00410	1097 aa	Known RBP	4.2	□□□□□ -1.74

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