RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TNFAIP3P21580 790 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 PCK1P35558 622 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 PBX1P40424 430 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 LSSP48449 732 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 PAPOLAP51003 745 aaKnown RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 DUSP3P51452 185 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 RHOAP61586 193 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 ELP6Q0PNE2 266 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 DPYSQ14117 519 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 PDE1CQ14123 709 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 PTK2BQ14289 1009 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 IQCB1Q15051 598 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 WSCD2Q2TBF2 565 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 ANO6Q4KMQ2 910 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 ZNF542PQ5EBM4 170 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 DCUN1D2Q6PH85 259 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 BRAT1Q6PJG6 821 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 LVRNQ6Q4G3 990 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 KDM7AQ6ZMT4 941 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 MACC1Q6ZN28 852 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 RFX8Q6ZV50 586 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 ZSWIM9Q86XI8 627 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 CBARPQ8N350 705 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 SDR16C5Q8N3Y7 309 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 RYBPQ8N488 228 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 BTN2A2Q8WVV5 523 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 SYN2Q92777 582 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 FGF11Q92914 225 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 NSMCE3Q96MG7 304 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 PCMTD1Q96MG8 357 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 NCAPGQ9BPX3 1015 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 SNRNP25Q9BV90 132 aaKnown RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 TRIM7Q9C029 511 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 CLPBQ9H078 707 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 PRORYQ9H606 182 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 HAUS4Q9H6D7 363 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 MBNL1Q9NR56 388 aaKnown RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 UBA2Q9UBT2 640 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 AP4E1Q9UPM8 1137 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 MGAQ8IWI9 3026 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 HELZ2Q9BYK8 2649 aaKnown RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 A0A1W2PNU3 283 aaPredicted RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 ARHGAP42A6NI28 874 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 SMTNL1A8MU46 457 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 H3BM21 787 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 NEMP1O14524 444 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 BRINP1O60477 761 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 LRCH4O75427 683 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 HOXC4P09017 264 aaPredicted RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 MYBL1P10243 752 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 MYF5P13349 255 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 GM2AP17900 193 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 ERCC2P18074 760 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 PSMA2P25787 234 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 MIPP30301 263 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 TRIM23P36406 574 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 EIF4A3P38919 411 aaKnown RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 MMP12P39900 470 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 RGRP47804 291 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 TPI1P60174 286 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 ERVPABLB-1P60509 514 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 SKOR1P84550 965 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 DAB2P98082 770 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 IL10RBQ08334 325 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 RALGDSQ12967 914 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 RFTN1Q14699 578 aaPredicted RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 DPYSL2Q16555 572 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 KLHL40Q2TBA0 621 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 TBC1D25Q3MII6 688 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 HS1BP3Q53T59 392 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 C6orf132Q5T0Z8 1188 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 HGSNATQ68CP4 663 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 SRLQ86TD4 932 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 PHACTR4Q8IZ21 702 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 LZTR1Q8N653 840 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 NPWQ8N729 165 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 NIPA2Q8N8Q9 360 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 NETO2Q8NC67 525 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 FAM71BQ8TC56 605 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 ZNF578Q96N58 590 aaPredicted RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 ZNF599Q96NL3 588 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 BBC3Q96PG8 261 aaPredicted RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 PSKH2Q96QS6 385 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 KCTD15Q96SI1 283 aaPredicted RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 LRRC61Q9BV99 259 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 C1QTNF7Q9BXJ2 289 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 TCEAL2Q9H3H9 227 aaPredicted RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 PCDH12Q9NPG4 1184 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 SEPT11Q9NVA2 429 aaKnown RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 CWC15Q9P013 229 aaKnown RBP8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 SPASTQ9UBP0 616 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 PCDHB1Q9Y5F3 818 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 DGKBQ9Y6T7 804 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 COL6A6A6NMZ7 2263 aa8.45□□□□□ -1.06
SMARCB1-207ENST00000491967 A0A1W2PQJ5 194 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 TK2O00142 265 aa8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 EEF2KO00418 725 aaKnown RBP8.44□□□□□ -1.06
SMARCB1-207ENST00000491967 NTN3O00634 580 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms