RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 MMP20O60882 483 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 CDC25BP30305 580 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 CYLC1P35663 651 aaPredicted RBP16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 HSPA9P38646 679 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 CCT8P50990 548 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 AP1S1P61966 158 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 IL9RQ01113 521 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 BCL2L1Q07817 233 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 HNRNPDQ14103 355 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 TMEM139Q8IV31 216 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 RHOT1Q8IXI2 618 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 PLD5Q8N7P1 536 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 OR13H1Q8NG92 308 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 SAP25Q8TEE9 199 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 FATE1Q969F0 183 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 CENPTQ96BT3 561 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 NUDCD1Q96RS6 583 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 GOLPH3Q9H4A6 298 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 ATP13A3Q9H7F0 1226 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 NOD2Q9HC29 1040 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 DTLQ9NZJ0 730 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 MATN3O15232 486 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 FLRT2O43155 660 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 HTRA2O43464 458 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 MAGEC1O60732 1142 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 PRKCGP05129 697 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 THEGLP0DJG4 465 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 CCNCP24863 283 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 SERPINA4P29622 427 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 MMP13P45452 471 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 NOP2P46087 812 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 MAXP61244 160 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 SIM1P81133 766 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 SGCGQ13326 291 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 ZNF235Q14590 738 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 IHHQ14623 411 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 SUZ12Q15022 739 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 TRIP6Q15654 476 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 TAZQ16635 292 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 ZFYVE27Q5T4F4 411 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 MARC1Q5VT66 337 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 KDM7AQ6ZMT4 941 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 Q6ZSR6 202 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 KANSL1Q7Z3B3 1105 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 GLRX5Q86SX6 157 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 SLC22A18ASQ8N1D0 253 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 CAAP1Q9H8G2 361 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 DUSP10Q9Y6W6 482 aa16.08■□□□□ 0.16
CTDSP1-209ENST00000488627 MMP12P39900 470 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 PFN3P60673 137 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 ELP6Q0PNE2 266 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 BNIP3Q12983 259 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 ALG1LQ6GMV1 187 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 MFSD7Q6UXD7 560 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 KYAT3Q6YP21 454 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 GATAD2AQ86YP4 633 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 DENND6BQ8NEG7 585 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 TPCN2Q8NHX9 752 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 FAM174AQ8TBP5 190 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 RHBDD1Q8TEB9 315 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 SETD7Q8WTS6 366 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 NSMCE1Q8WV22 266 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 WRAP53Q9BUR4 548 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 IMPACTQ9P2X3 320 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 ATP8A1Q9Y2Q0 1164 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 PCDHGC4Q9Y5F7 938 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 PLXNA2O75051 1894 aa16.07■□□□□ 0.16
CTDSP1-209ENST00000488627 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 A6NNZ2 444 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 YKT6O15498 198 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 SPOPO43791 374 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 TM7SF2O76062 418 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 KRT1P04264 644 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 XPAP23025 273 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 EPHA8P29322 1005 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 CDKN2BP42772 138 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 ARRB1P49407 418 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 SHC2P98077 582 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 SEMG2Q02383 582 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 TRAF2Q12933 501 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 RALGDSQ12967 914 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 RALGPS1Q5JS13 557 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 TPRG1LQ5T0D9 272 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 C11orf63Q6NUN7 778 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 BBS5Q8N3I7 341 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 OXR1Q8N573 874 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 SPC24Q8NBT2 197 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 CXorf40AQ8TE69 158 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 HDAC11Q96DB2 347 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 LACRTQ9GZZ8 138 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 NT5MQ9NPB1 228 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 LUC7LQ9NQ29 371 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 SCUBE2Q9NQ36 999 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms