RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 RFC1P35251 1148 aaPredicted RBP16.36■□□□□ 0.21
SRRT-212ENST00000487311 PTPN9P43378 593 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 HK3P52790 923 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 CDR2Q01850 454 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 SPIDRQ14159 915 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 ALG11Q2TAA5 492 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 ZSCAN23Q3MJ62 389 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 TMEM52BQ4KMG9 183 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 ESRP1Q6NXG1 681 aaKnown RBP16.36■□□□□ 0.21
SRRT-212ENST00000487311 CCDC81Q6ZN84 652 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 STRADAQ7RTN6 431 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 RD3Q7Z3Z2 195 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 HID1Q8IV36 788 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 ARL14Q8N4G2 192 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 KYQ8NBH2 561 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 MSANTD4Q8NCY6 345 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 PCDH19Q8TAB3 1148 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 FAM172AQ8WUF8 416 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 GLMNQ92990 594 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 NAT6Q93015 286 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 FUBP1Q96AE4 644 aaKnown RBP16.36■□□□□ 0.21
SRRT-212ENST00000487311 HMCESQ96FZ2 354 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 FOXP3Q9BZS1 431 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 SYNDIG1Q9H7V2 258 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 DKK3Q9UBP4 350 aa16.36■□□□□ 0.21
SRRT-212ENST00000487311 EPHB6O15197 1021 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 BUB1BO60566 1050 aaPredicted RBP16.35■□□□□ 0.21
SRRT-212ENST00000487311 UNGP13051 313 aaPredicted RBP16.35■□□□□ 0.21
SRRT-212ENST00000487311 HGFP14210 728 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 SLC5A2P31639 672 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 INPP5AQ14642 412 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 LRRC14Q15048 493 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 TGIF1Q15583 401 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 INO80DQ53TQ3 878 aaPredicted RBP16.35■□□□□ 0.21
SRRT-212ENST00000487311 TCP11X2Q5H9J9 407 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 WDR59Q6PJI9 974 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 ENPP7Q6UWV6 458 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 ZNF354CQ86Y25 554 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 SFTPA2Q8IWL1 248 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 RTL3Q8N8U3 475 aaKnown RBP16.35■□□□□ 0.21
SRRT-212ENST00000487311 EXD3Q8N9H8 876 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 CCDC74AQ96AQ1 378 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 CCDC97Q96F63 343 aaPredicted RBP16.35■□□□□ 0.21
SRRT-212ENST00000487311 MED8Q96G25 268 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 EXOC2Q96KP1 924 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 GDAP1L1Q96MZ0 367 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 APOOQ9BUR5 198 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 EDEM3Q9BZQ6 932 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 TAB2Q9NYJ8 693 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 LHX3Q9UBR4 397 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 OR1A2Q9Y585 309 aa16.35■□□□□ 0.21
SRRT-212ENST00000487311 RASA4BC9J798 803 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 RASA4O43374 803 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 PRKCGP05129 697 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 ITGA2BP08514 1039 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 KRT3P12035 628 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 ERCC5P28715 1186 aaPredicted RBP16.34■□□□□ 0.21
SRRT-212ENST00000487311 PEX5P50542 639 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 JAM2P57087 298 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 POLR2FP61218 127 aaKnown RBP16.34■□□□□ 0.21
SRRT-212ENST00000487311 RHOAP61586 193 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 RAD51Q06609 339 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 LINC00303Q3SY05 128 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 SLFN11Q7Z7L1 901 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 ZSWIM9Q86XI8 627 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 ZNF677Q86XU0 584 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 SDR16C5Q8N3Y7 309 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 FBXO39Q8N4B4 442 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 ARL10Q8N8L6 244 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 WDR48Q8TAF3 677 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 NTAN1Q96AB6 310 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 LIN37Q96GY3 246 aaPredicted RBP16.34■□□□□ 0.21
SRRT-212ENST00000487311 CCNL2Q96S94 520 aaPredicted RBP16.34■□□□□ 0.21
SRRT-212ENST00000487311 CPEB1Q9BZB8 566 aaKnown RBP16.34■□□□□ 0.21
SRRT-212ENST00000487311 PCDH12Q9NPG4 1184 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 GPR34Q9UPC5 381 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 DOLKQ9UPQ8 538 aa16.34■□□□□ 0.21
SRRT-212ENST00000487311 ZSCAN5CA6NGD5 496 aaPredicted RBP16.33■□□□□ 0.2
SRRT-212ENST00000487311 AGRPO00253 132 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 TOR1BO14657 336 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 PLD2O14939 933 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 IGSF6O95976 241 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 CTSEP14091 401 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 EPHB2P29323 1055 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 UGT1A5P35504 534 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 SOX5P35711 763 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 SRP54P61011 504 aaKnown RBP16.33■□□□□ 0.2
SRRT-212ENST00000487311 SERINC3Q13530 473 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 ELOCQ15369 112 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 UGP2Q16851 508 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 LVRNQ6Q4G3 990 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 RAB11FIP2Q7L804 512 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 FSTL5Q8N475 847 aaPredicted RBP16.33■□□□□ 0.2
SRRT-212ENST00000487311 PLA2G15Q8NCC3 412 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 GFM1Q96RP9 751 aaKnown RBP16.33■□□□□ 0.2
SRRT-212ENST00000487311 C1QTNF7Q9BXJ2 289 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 VPS16Q9H269 839 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 LRRN3Q9H3W5 708 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 CLSTN2Q9H4D0 955 aa16.33■□□□□ 0.2
SRRT-212ENST00000487311 SUV39H2Q9H5I1 410 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms