RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 PYGMP11217 842 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 RGRP47804 291 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 TAS2R38P59533 333 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 SGCGQ13326 291 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 UGP2Q16851 508 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 ARMC12Q5T9G4 340 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 MEI1Q5TIA1 1274 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 NPNTQ6UXI9 565 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 IQCHQ86VS3 1027 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 CAMK1DQ8IU85 385 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 ZCCHC9Q8N567 271 aaKnown RBP14.77□□□□□ -0.05
LIMS3-205ENST00000487150 DENND6BQ8NEG7 585 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 NETO1Q8TDF5 533 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 CXorf40AQ8TE69 158 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 MAIP1Q8WWC4 291 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 ASB12Q8WXK4 309 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 SERAC1Q96JX3 654 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 SEMA3CQ99985 751 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 HEMGNQ9BXL5 484 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 NOD2Q9HC29 1040 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 KCTD5Q9NXV2 234 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 SEPT10Q9P0V9 454 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 TRHDEQ9UKU6 1024 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 PACSIN2Q9UNF0 486 aaPredicted RBP14.77□□□□□ -0.05
LIMS3-205ENST00000487150 A0A1W2PQU0 124 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 H7C0C1 242 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 PLK4O00444 970 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 TRAFD1O14545 582 aaPredicted RBP14.76□□□□□ -0.05
LIMS3-205ENST00000487150 JCHAINP01591 159 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 PECAM1P16284 738 aaPredicted RBP14.76□□□□□ -0.05
LIMS3-205ENST00000487150 HNRNPA2B1P22626 353 aaKnown RBP14.76□□□□□ -0.05
LIMS3-205ENST00000487150 ABL2P42684 1182 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 ATP5OP48047 213 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 C21orf59P57076 290 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 MAXP61244 160 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 TMEM259Q4ZIN3 620 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 PGBD5Q8N414 524 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 DCLK2Q8N568 766 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 HTR3CQ8WXA8 447 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 LRRC45Q96CN5 670 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 EDEM2Q9BV94 578 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 ADGRE3Q9BY15 652 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 CAPN10Q9HC96 672 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 TM9SF3Q9HD45 589 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 AASDHPPTQ9NRN7 309 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 PHTF1Q9UMS5 762 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 JRKLQ9Y4A0 524 aa14.76□□□□□ -0.05
LIMS3-205ENST00000487150 ZFHX2Q9C0A1 2572 aaPredicted RBP14.75□□□□□ -0.05
LIMS3-205ENST00000487150 DFNA5O60443 496 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 PGLSO95336 258 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 CER1O95813 267 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 HLA-DQB2P05538 268 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 CYP2A6P11509 494 aaPredicted RBP14.75□□□□□ -0.05
LIMS3-205ENST00000487150 TIMP2P16035 220 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 MMP12P39900 470 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 LIMK1P53667 647 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 EPHB1P54762 984 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 EIF3EP60228 445 aaKnown RBP14.75□□□□□ -0.05
LIMS3-205ENST00000487150 PPP2CBP62714 309 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 PPP2CAP67775 309 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 OTUD4Q01804 1114 aaKnown RBP14.75□□□□□ -0.05
LIMS3-205ENST00000487150 STAT4Q14765 748 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 ZNF284Q2VY69 593 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 TEX44Q53QW1 395 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 ITPRIPL1Q6GPH6 555 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 ZC3H18Q86VM9 953 aaKnown RBP14.75□□□□□ -0.05
LIMS3-205ENST00000487150 KIAA2013Q8IYS2 634 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 ACTL9Q8TC94 416 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 PDCD6IPQ8WUM4 868 aaKnown RBP14.75□□□□□ -0.05
LIMS3-205ENST00000487150 SLC25A51Q9H1U9 297 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 KCNF1Q9H3M0 494 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 PARD6AQ9NPB6 346 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 PCDH12Q9NPG4 1184 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 TMEM74BQ9NUR3 256 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 KLHL8Q9P2G9 620 aaPredicted RBP14.75□□□□□ -0.05
LIMS3-205ENST00000487150 SAE1Q9UBE0 346 aaPredicted RBP14.75□□□□□ -0.05
LIMS3-205ENST00000487150 RAI2Q9Y5P3 530 aa14.75□□□□□ -0.05
LIMS3-205ENST00000487150 LNP1A1A4G5 178 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 RNF103O00237 685 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 ARHGAP33O14559 1287 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 KCNK3O14649 394 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 TOR1BO14657 336 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 VILLO15195 856 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 TM7SF2O76062 418 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 RBP3P10745 1247 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 TGM1P22735 817 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 MAT2AP31153 395 aaKnown RBP14.74□□□□□ -0.05
LIMS3-205ENST00000487150 DSC2Q02487 901 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 ZBTB17Q13105 803 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 ZNF211Q13398 564 aaPredicted RBP14.74□□□□□ -0.05
LIMS3-205ENST00000487150 LLGL1Q15334 1064 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 TMEM52BQ4KMG9 183 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 OXR1Q8N573 874 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 MFSD2AQ8NA29 543 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 C1orf216Q8TAB5 229 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 VOPP1Q96AW1 172 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 TEKT5Q96M29 485 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 AGAP3Q96P47 875 aa14.74□□□□□ -0.05
LIMS3-205ENST00000487150 LENG8Q96PV6 779 aaPredicted RBP14.74□□□□□ -0.05
LIMS3-205ENST00000487150 SRPK1Q96SB4 655 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms