RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 SNX15Q9NRS6 342 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 DZANK1Q9NVP4 752 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 SIRPGQ9P1W8 387 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 SLC17A7Q9P2U7 560 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 LHX3Q9UBR4 397 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 FBXO5Q9UKT4 447 aa11.72□□□□□ -0.53
PRKCB-207ENST00000486868 USP15Q9Y4E8 981 aaPredicted RBP11.72□□□□□ -0.53
PRKCB-207ENST00000486868 A0A1W2PQ67 120 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 FZD6O60353 706 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 SNAP91O60641 907 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 SOCS5O75159 536 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 RFPL2O75678 378 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 RPP40O75818 363 aaKnown RBP11.71□□□□□ -0.53
PRKCB-207ENST00000486868 ARHGEF15O94989 841 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 PRLP01236 227 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 AHSGP02765 367 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 OGNP20774 298 aaKnown RBP11.71□□□□□ -0.53
PRKCB-207ENST00000486868 GLDCP23378 1020 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 RGRP47804 291 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 SCNN1BP51168 640 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 CLCN5P51795 746 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 PRKAA2P54646 552 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 POU4F1Q01851 419 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 LMAN2Q12907 356 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 SEPT6Q14141 434 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 ZKSCAN8Q15776 578 aaPredicted RBP11.71□□□□□ -0.53
PRKCB-207ENST00000486868 DUSP6Q16828 381 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 CDHR3Q6ZTQ4 885 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 KIAA0907Q7Z7F0 614 aaPredicted RBP11.71□□□□□ -0.53
PRKCB-207ENST00000486868 SRLQ86TD4 932 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 OR13J1Q8NGT2 312 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 IRF7Q92985 503 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 TCEAL4Q96EI5 215 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 PAIP2Q9BPZ3 127 aaKnown RBP11.71□□□□□ -0.53
PRKCB-207ENST00000486868 CEP44Q9C0F1 390 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 MLXIPLQ9NP71 852 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 PCMTD2Q9NV79 361 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 FGFR1OP2Q9NVK5 253 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 NLE1Q9NVX2 485 aaPredicted RBP11.71□□□□□ -0.53
PRKCB-207ENST00000486868 HCFC1R1Q9NWW0 138 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 OBP2AQ9NY56 170 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 HS3ST2Q9Y278 367 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 RAI2Q9Y5P3 530 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 HCFC2Q9Y5Z7 792 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 PLXNA4Q9HCM2 1894 aa11.71□□□□□ -0.53
PRKCB-207ENST00000486868 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.7□□□□□ -0.54
PRKCB-207ENST00000486868 CCDC195A0A1B0GUA6 201 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.7□□□□□ -0.54
PRKCB-207ENST00000486868 C2orf81A6NN90 581 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 ANKRD66B4E2M5 251 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 H7C0S8 307 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 NRG2O14511 850 aaPredicted RBP11.7□□□□□ -0.54
PRKCB-207ENST00000486868 HTRA2O43464 458 aaPredicted RBP11.7□□□□□ -0.54
PRKCB-207ENST00000486868 PLIN3O60664 434 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 BPGMP07738 259 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 GJA1P17302 382 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 GABRB3P28472 473 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 SLC26A3P40879 764 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 RHOAP61586 193 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 PRAMEP78395 509 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 KCNC3Q14003 757 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 GRM3Q14832 879 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 SHHQ15465 462 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 C9orf50Q5SZB4 431 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 MRNIPQ6NTE8 343 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 SPATA21Q7Z572 469 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
PRKCB-207ENST00000486868 CELF5Q8N6W0 485 aaKnown RBP11.7□□□□□ -0.54
PRKCB-207ENST00000486868 RDH11Q8TC12 318 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 WFDC5Q8TCV5 224 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 PPP2R3CQ969Q6 453 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 TSPAN17Q96FV3 270 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 C7orf26Q96N11 449 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 TUBGCP5Q96RT8 1024 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 TCF12Q99081 682 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 ELAC2Q9BQ52 826 aaKnown RBP11.7□□□□□ -0.54
PRKCB-207ENST00000486868 SLC13A1Q9BZW2 595 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 SFXN1Q9H9B4 322 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 MAGEE1Q9HCI5 957 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 SPHK2Q9NRA0 654 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 SLC2A6Q9UGQ3 507 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 FBXO10Q9UK96 956 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 TLK1Q9UKI8 766 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 PHTF1Q9UMS5 762 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 ARL2BPQ9Y2Y0 163 aa11.7□□□□□ -0.54
PRKCB-207ENST00000486868 MTO1Q9Y2Z2 717 aaKnown RBP11.7□□□□□ -0.54
PRKCB-207ENST00000486868 SHROOM3Q8TF72 1996 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 MTCL1Q9Y4B5 1905 aaKnown RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 A0A087X1B8 175 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 A0A096LPK6 155 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 H2AFYO75367 372 aaKnown RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 IGSF6O95976 241 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 GSRP00390 522 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 PROCP04070 461 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 C2P06681 752 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 MYOGP15173 224 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 SLC1A2P43004 574 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 MAGEA10P43363 369 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms