RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 VILLO15195 856 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 LZTS3O60299 673 aaPredicted RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 CST8O60676 142 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 TM7SF2O76062 418 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 GOLGA6DP0CG33 693 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 THEGLP0DJG4 465 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 CCNB1P14635 433 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 TIMP2P16035 220 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 ZFXP17010 805 aaPredicted RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 CTNNA2P26232 953 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 CCT8P50990 548 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 DSC2Q02487 901 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 TFDP2Q14188 446 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 ZNF284Q2VY69 593 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 BRAT1Q6PJG6 821 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 ZC3H18Q86VM9 953 aaKnown RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 TMEM139Q8IV31 216 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 PGBD5Q8N414 524 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 FAM71BQ8TC56 605 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 RBM41Q96IZ5 413 aaKnown RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 ZNF641Q96N77 438 aaPredicted RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 PSKH2Q96QS6 385 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 SEMA3CQ99985 751 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 HEMGNQ9BXL5 484 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 POLR1EQ9GZS1 481 aaKnown RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 GRPEL1Q9HAV7 217 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 NOD2Q9HC29 1040 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 PCDH12Q9NPG4 1184 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 GOLGA6AQ9NYA3 693 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 DTLQ9NZJ0 730 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 SAE1Q9UBE0 346 aaPredicted RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 SALL4Q9UJQ4 1053 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 PACSIN2Q9UNF0 486 aaPredicted RBP12.09□□□□□ -0.47
GSDMB-210ENST00000486560 DMDP11532 3685 aa12.09□□□□□ -0.47
GSDMB-210ENST00000486560 A0A0U1RQJ8 604 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 C3orf70A6NLC5 250 aaPredicted RBP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 A6NNZ2 444 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 F5H423 210 aaPredicted RBP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 TLR4O00206 839 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 MATN3O15232 486 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 LATO43561 262 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 SH3BP5O60239 455 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 MAGEC1O60732 1142 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 SDC3O75056 442 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 FTCDO95954 541 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 PCCBP05166 539 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 ELFN1P0C7U0 828 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 C7P10643 843 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 CTPS1P17812 591 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 FECHP22830 423 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 CCNCP24863 283 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 NUDT1P36639 197 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 CETN2P41208 172 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 CSNK1DP48730 415 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 ARRB1P49407 418 aaPredicted RBP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 HADHBP55084 474 aaKnown RBP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 POLR2LP62875 67 aaKnown RBP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 BNC1Q01954 994 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 SLC10A2Q12908 348 aaPredicted RBP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 SUZ12Q15022 739 aaKnown RBP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 PDK1Q15118 436 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 UGP2Q16851 508 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 TFDP3Q5H9I0 405 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 NEK5Q6P3R8 708 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 GATAD2AQ86YP4 633 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 NAXDQ8IW45 347 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 RCOR2Q8IZ40 523 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 PLD5Q8N7P1 536 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 OR13H1Q8NG92 308 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 C1orf216Q8TAB5 229 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 ANP32BQ92688 251 aaKnown RBP12.08□□□□□ -0.48
GSDMB-210ENST00000486560 KRT35Q92764 455 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 P3H4Q92791 437 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 FAF2Q96CS3 445 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 CAMK1GQ96NX5 476 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 NUDCD1Q96RS6 583 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 ORAI3Q9BRQ5 295 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 C1QTNF7Q9BXJ2 289 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 DKK3Q9UBP4 350 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 AMFRQ9UKV5 643 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 ATP8A1Q9Y2Q0 1164 aa12.08□□□□□ -0.48
GSDMB-210ENST00000486560 CEP250Q9BV73 2442 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 SPAARA0A1B0GVQ0 90 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 H7C0C1 242 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 AP1G1O43747 822 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 KCNK5O95279 499 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 JCHAINP01591 159 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 HLA-DQB2P05538 268 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 ITGAVP06756 1048 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 NFKBIAP25963 317 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 CTSKP43235 329 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 ATP5OP48047 213 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 THOP1P52888 689 aa12.07□□□□□ -0.48
GSDMB-210ENST00000486560 NSUN2Q08J23 767 aaKnown RBP eCLIP12.07□□□□□ -0.48
GSDMB-210ENST00000486560 TRAF2Q12933 501 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms