RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 INAVAQ3KP66 663 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 TMEM52BQ4KMG9 183 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 BRAT1Q6PJG6 821 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 KYAT3Q6YP21 454 aaKnown RBP13.02□□□□□ -0.33
HDAC1-209ENST00000484305 PGBD5Q8N414 524 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 EID2Q8N6I1 236 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 TC2NQ8N9U0 490 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 PCDH19Q8TAB3 1148 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 CXorf40AQ8TE69 158 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 ASB12Q8WXK4 309 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 ADAMTS14Q8WXS8 1223 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 CENPTQ96BT3 561 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 ZNF599Q96NL3 588 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 RBSNQ9H1K0 784 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 ATP13A3Q9H7F0 1226 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 PCDH12Q9NPG4 1184 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 GPR27Q9NS67 375 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 FTSJ1Q9UET6 329 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 SEPT3Q9UH03 358 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 C1QTNF9BB2RNN3 333 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
HDAC1-209ENST00000484305 FPGTO14772 594 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 MFSD11O43934 449 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 TM7SF2O76062 418 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 DKK1O94907 266 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 PRKCGP05129 697 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 KRT7P08729 469 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 C1QTNF9P0C862 333 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 XPAP23025 273 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-209ENST00000484305 SERPINA4P29622 427 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 MAN1A1P33908 653 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 RENBPP51606 427 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 SUOXP51687 545 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 SEMG2Q02383 582 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 BCL2L1Q07817 233 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 ELP6Q0PNE2 266 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 FZD2Q14332 565 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 ZNF235Q14590 738 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 PDK2Q15119 407 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 ANKRD20A8PQ5CZ79 823 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 ZNF542PQ5EBM4 170 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 TPRG1LQ5T0D9 272 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 CFAP58Q5T655 872 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 NCBP2-AS2Q69YL0 99 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 SLC25A45Q8N413 288 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 ATPAF2Q8N5M1 289 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 DENND6BQ8NEG7 585 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 FAM174AQ8TBP5 190 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 MBNL1Q9NR56 388 aaKnown RBP13.01□□□□□ -0.33
HDAC1-209ENST00000484305 UCKL1Q9NWZ5 548 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 LCMT1Q9UIC8 334 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 COQ6Q9Y2Z9 468 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 NEUROG3Q9Y4Z2 214 aa13.01□□□□□ -0.33
HDAC1-209ENST00000484305 FRYQ5TBA9 3013 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 SPTY2D1-AS1A0A0U1RR47 76 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 FAM221BA6H8Z2 402 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 TRAFD1O14545 582 aaPredicted RBP13□□□□□ -0.33
HDAC1-209ENST00000484305 MTA2O94776 668 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 MAP3K6O95382 1288 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 LDOC1O95751 146 aaPredicted RBP13□□□□□ -0.33
HDAC1-209ENST00000484305 CR2P20023 1033 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 DGKAP23743 735 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 KDELR1P24390 212 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 IGFALSP35858 605 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 MMP12P39900 470 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 ARHGAP25P42331 645 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 RABIFP47224 123 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 ZNF75DP51815 510 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 PFN3P60673 137 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 AP1S1P61966 158 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 PDE1CQ14123 709 aaPredicted RBP13□□□□□ -0.33
HDAC1-209ENST00000484305 PAFAH1B3Q15102 231 aaKnown RBP13□□□□□ -0.33
HDAC1-209ENST00000484305 CCDC157Q569K6 752 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 GAS2L3Q86XJ1 694 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 DCP2Q8IU60 420 aaKnown RBP13□□□□□ -0.33
HDAC1-209ENST00000484305 MAP7D3Q8IWC1 876 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 RHOT2Q8IXI1 618 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 PQLC3Q8N755 202 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 TP53I13Q8NBR0 393 aaPredicted RBP13□□□□□ -0.33
HDAC1-209ENST00000484305 RFFLQ8WZ73 363 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 RAPGEF5Q92565 580 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 FAF2Q96CS3 445 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 ECHDC3Q96DC8 303 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 CNDP2Q96KP4 475 aaKnown RBP13□□□□□ -0.33
HDAC1-209ENST00000484305 ZNF670Q9BS34 389 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
HDAC1-209ENST00000484305 DNAJC28Q9NX36 388 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 ATP8A1Q9Y2Q0 1164 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 MSRB2Q9Y3D2 182 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 PCDHGC4Q9Y5F7 938 aa13□□□□□ -0.33
HDAC1-209ENST00000484305 EPG5Q9HCE0 2579 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 GOLGA4Q13439 2230 aaKnown RBP12.99□□□□□ -0.33
HDAC1-209ENST00000484305 TRIM38O00635 465 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 ENC1O14682 589 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 PIAS2O75928 621 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 C6P13671 934 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 GARSP41250 739 aaKnown RBP12.99□□□□□ -0.33
HDAC1-209ENST00000484305 MMP13P45452 471 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 LIG3P49916 1009 aa12.99□□□□□ -0.33
HDAC1-209ENST00000484305 MAXP61244 160 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms