RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SOCS5O75159 536 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 ACSL3O95573 720 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 EGFP01133 1207 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 FGF1P05230 155 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 SERPINA4P29622 427 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 SEC13P55735 322 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 SLC29A2Q14542 456 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 GRM3Q14832 879 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 E2F5Q15329 346 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 HNRNPA1L2Q32P51 320 aaKnown RBP17.72■□□□□ 0.43
UPF3A-206ENST00000480362 ARMC12Q5T9G4 340 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 ZNF513Q8N8E2 541 aaPredicted RBP17.72■□□□□ 0.43
UPF3A-206ENST00000480362 LPCAT1Q8NF37 534 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 RMDN1Q96DB5 314 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 TTC25Q96NG3 672 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 ADGRE3Q9BY15 652 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 SUV39H2Q9H5I1 410 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 LRRC4CQ9HCJ2 640 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 ZC3H7BQ9UGR2 993 aaKnown RBP17.72■□□□□ 0.43
UPF3A-206ENST00000480362 SUN2Q9UH99 717 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 C5orf42Q9H799 3197 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 MUC22E2RYF6 1773 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-206ENST00000480362 MAGEB16A2A368 324 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 HTRA2O43464 458 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-206ENST00000480362 SIN3BO75182 1162 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 PGLSO95336 258 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 ALADP13716 330 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 DRD1P21728 446 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 PRKCHP24723 683 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 SSTR1P30872 391 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 TIE1P35590 1138 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 KIR2DL1P43626 348 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-206ENST00000480362 GPX6P59796 221 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 GRSF1Q12849 480 aaKnown RBP eCLIP17.71■□□□□ 0.43
UPF3A-206ENST00000480362 MSLNQ13421 630 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-206ENST00000480362 POU6F1Q14863 301 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 PCID2Q5JVF3 399 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 C9orf64Q5T6V5 341 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 GDPD4Q6W3E5 623 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 CAPN12Q6ZSI9 719 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 PAF1Q8N7H5 531 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 UHMK1Q8TAS1 419 aaKnown RBP17.71■□□□□ 0.43
UPF3A-206ENST00000480362 GRIN3AQ8TCU5 1115 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 FAM3CQ92520 227 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 CFAP36Q96G28 342 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 MSANTD3Q96H12 275 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 ZNF641Q96N77 438 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-206ENST00000480362 NAT9Q9BTE0 207 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 VPS37BQ9H9H4 285 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 CACNA2D2Q9NY47 1150 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 SAMD15Q9P1V8 674 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 DUSP12Q9UNI6 340 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 STON1Q9Y6Q2 735 aa17.71■□□□□ 0.43
UPF3A-206ENST00000480362 ANKRD36A6QL64 1941 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 SHISA7A6NL88 538 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 ANKRD66B4E2M5 251 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 NPC1O15118 1278 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 UGT2B4P06133 528 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 EPHX1P07099 455 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 TSHRP16473 764 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 SLC8A1P32418 973 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 WASP42768 502 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 EPHB1P54762 984 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 ENPP2Q13822 863 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 QPCTQ16769 361 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 ARSIQ5FYB1 569 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 CFAP58Q5T655 872 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 TPRG1Q6ZUI0 275 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 C3orf62Q6ZUJ4 267 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 CCNJLQ8IV13 435 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 CHPFQ8IZ52 775 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 STK40Q8N2I9 435 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 PIH1D2Q8WWB5 315 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 TRIM56Q9BRZ2 755 aaKnown RBP17.7■□□□□ 0.42
UPF3A-206ENST00000480362 CHRAC1Q9NRG0 131 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 IL36AQ9UHA7 158 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 SORCS3Q9UPU3 1222 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 WASF2Q9Y6W5 498 aa17.7■□□□□ 0.42
UPF3A-206ENST00000480362 C19orf67A6NJJ6 358 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 LEFTY1O75610 366 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 PRKCGP05129 697 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 CTSLP07711 333 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 PIRTP0C851 137 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 PGAM1P18669 254 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 ADRA1DP25100 572 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
UPF3A-206ENST00000480362 SEPT6Q14141 434 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 MLF2Q15773 248 aaPredicted RBP17.69■□□□□ 0.42
UPF3A-206ENST00000480362 C2orf27AQ580R0 203 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 PKN3Q6P5Z2 889 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 CES3Q6UWW8 571 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 UNC5AQ6ZN44 842 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 IQCKQ8N0W5 287 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 PPHLN1Q8NEY8 458 aaKnown RBP17.69■□□□□ 0.42
UPF3A-206ENST00000480362 BLOC1S5Q8TDH9 187 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 ECHDC3Q96DC8 303 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 LRIG1Q96JA1 1093 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 KLHL32Q96NJ5 620 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 SMIM14Q96QK8 99 aa17.69■□□□□ 0.42
UPF3A-206ENST00000480362 RANBP9Q96S59 729 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms