RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ZSCAN5CA6NGD5 496 aaPredicted RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 H0Y8X5 98 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 CEP104O60308 925 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 ZNF821O75541 412 aaPredicted RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 TJP3O95049 919 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 CER1O95813 267 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 IGHV4-34P06331 123 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 TGM2P21980 687 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 MSNP26038 577 aaKnown RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 GKP32189 559 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 PTPN7P35236 360 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 RECQLP46063 649 aaPredicted RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 CLCN6P51797 869 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 GEMIN4P57678 1058 aaKnown RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 OTUD4Q01804 1114 aaKnown RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 SLC20A2Q08357 652 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 SLC10A7Q0GE19 358 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 AP1B1Q10567 949 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 LBRQ14739 615 aaKnown RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 POM121L1PQ3SYA9 428 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 TENM4Q6N022 2769 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 KDM1BQ8NB78 822 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 CHST14Q8NCH0 376 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 GRIN3AQ8TCU5 1115 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 HNRNPLLQ8WVV9 542 aaKnown RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 CINPQ9BW66 212 aaPredicted RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 CEP41Q9BYV8 373 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 ASXL3Q9C0F0 2248 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 LHX3Q9UBR4 397 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 DKK4Q9UBT3 224 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 SERGEFQ9UGK8 458 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 ANKRD6Q9Y2G4 727 aa9.18□□□□□ -0.94
VCP-206ENST00000480327 TDRD6O60522 2096 aaKnown RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 COL27A1Q8IZC6 1860 aaPredicted RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 TARSL2A2RTX5 802 aaKnown RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 TRABD2BA6NFA1 517 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 H7C0C1 242 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 KCNK1O00180 336 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 RNF103O00237 685 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 KRIT1O00522 736 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 WNT9AO14904 365 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 PPP1R12AO14974 1030 aaPredicted RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 MUSKO15146 869 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 INSIG1O15503 277 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 FLRT2O43155 660 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 NEBLO76041 1014 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 PEX11BO96011 259 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 IL1BP01584 269 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 APOC2P02655 101 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 WNT1P04628 370 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 ACADMP11310 421 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 MX2P20592 715 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 CCNCP24863 283 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 CTSKP43235 329 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 RGRP47804 291 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 ATP5OP48047 213 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 PSMD8P48556 350 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 NR2C2P49116 596 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 AFF3P51826 1226 aaKnown RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 CLDN6P56747 220 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 MAXP61244 160 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 IL9RQ01113 521 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 ITKQ08881 620 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 ZNF235Q14590 738 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 PDK1Q15118 436 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 SHBQ15464 509 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 CARD16Q5EG05 197 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 TMCO4Q5TGY1 634 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 IL27RAQ6UWB1 636 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 DPY19L3Q6ZPD9 716 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 SLC13A5Q86YT5 568 aaPredicted RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 MMAAQ8IVH4 418 aaKnown RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 CCDC13Q8IYE1 715 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 PCDH20Q8N6Y1 951 aaKnown RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 TSEN2Q8NCE0 465 aaKnown RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 OR2A12Q8NGT7 310 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 ACTL9Q8TC94 416 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 RHBDD1Q8TEB9 315 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 NSMCE1Q8WV22 266 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 OR8D1Q8WZ84 308 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 SNX19Q92543 992 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 MS4A14Q96JA4 679 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 OLFM3Q96PB7 478 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 FAM129BQ96TA1 746 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 CEP44Q9C0F1 390 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 PCED1AQ9H1Q7 454 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 CARD9Q9H257 536 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 ZDHHC6Q9H6R6 413 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 NT5MQ9NPB1 228 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 KCND1Q9NSA2 647 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 SMARCAL1Q9NZC9 954 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 HECAQ9UBI9 543 aaPredicted RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 EFR3BQ9Y2G0 817 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 R3HDM2Q9Y2K5 976 aaKnown RBP9.17□□□□□ -0.94
VCP-206ENST00000480327 ZKSCAN5Q9Y2L8 839 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 TTLL3Q9Y4R7 772 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 PTPRQQ9UMZ3 2332 aa9.17□□□□□ -0.94
VCP-206ENST00000480327 PLK4O00444 970 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms