RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 C18orf8Q96DM3 657 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 WDR26Q9H7D7 661 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 SAMD4AQ9UPU9 718 aaKnown RBP11.06□□□□□ -0.64
EWSR1-216ENST00000479135 APBA3O96018 575 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 MGST1P10620 155 aaKnown RBP11.06□□□□□ -0.64
EWSR1-216ENST00000479135 PSEN2P49810 448 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 TAF6P49848 677 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 UGT8Q16880 541 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 ODF4Q2M2E3 257 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 BROXQ5VW32 411 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 SNX20Q7Z614 316 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 TMED4Q7Z7H5 227 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 RASGEF1CQ8N431 466 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 ESX1Q8N693 406 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 LINS1Q8NG48 757 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 MRPL38Q96DV4 380 aaKnown RBP11.06□□□□□ -0.64
EWSR1-216ENST00000479135 ARL5BQ96KC2 179 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 UGT2B28Q9BY64 529 aa11.06□□□□□ -0.64
EWSR1-216ENST00000479135 WASH3PC4AMC7 463 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 LRG1P02750 347 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 RBP3P10745 1247 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 OGNP20774 298 aaKnown RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 SPAM1P38567 509 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 CORO7P57737 925 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 LCN1P1Q5VSP4 162 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 NIPAL3Q6P499 406 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 SPATA9Q9BWV2 254 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 CATSPERBQ9H7T0 1116 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 DCLRE1BQ9H816 532 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 DNAJB4Q9UDY4 337 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 MYOM2P54296 1465 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 TEX51A0A1B0GUA7 166 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 EEF1A1P68104 462 aaKnown RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 MAP2K5Q13163 448 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 EEF1A1P5Q5VTE0 462 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 MCEMP1Q8IX19 187 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ZNF398Q8TD17 642 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 SMARCD2Q92925 531 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 C5orf34Q96MH7 638 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 PCDHA2Q9Y5H9 948 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 AHSA1O95433 338 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 LATS1O95835 1130 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 CSF1RP07333 972 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 PECAM1P16284 738 aaPredicted RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 MAPK12P53778 367 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 SLC26A5P58743 744 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 SNX17Q15036 470 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 PPP2R5BQ15173 497 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 SMARCD3Q6STE5 483 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 HFE2Q6ZVN8 426 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ZNF677Q86XU0 584 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ZSCAN1Q8NBB4 408 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ZFP14Q9HCL3 533 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 TM9SF3Q9HD45 589 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 GPATCH2LQ9NWQ4 482 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ACTR10Q9NZ32 417 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 CENPBD1B2RD01 187 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 TYMPP19971 482 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 MSX2P35548 267 aaPredicted RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 EPHA7Q15375 998 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 TATDN3Q17R31 274 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 CCDC58Q4VC31 144 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 PRMT9Q6P2P2 845 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 AMIGO2Q86SJ2 522 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 BPIFB1Q8TDL5 484 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ATG4AQ8WYN0 398 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ZNF75CPQ92670 426 aaPredicted RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ALG2Q9H553 416 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 QSOX1O00391 747 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 RHOBTB3O94955 611 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 TXNP10599 105 aaKnown RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 CD86P42081 329 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 SLC12A3P55017 1021 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 NAA20P61599 178 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ZNF177Q13360 481 aaPredicted RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 ALG10BQ5I7T1 473 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 NIPAL1Q6NVV3 410 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 C10orf107Q8IVU9 208 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 KYQ8NBH2 561 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 CEP76Q8TAP6 659 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 C12orf43Q96C57 262 aaKnown RBP11.05□□□□□ -0.64
EWSR1-216ENST00000479135 BRINP2Q9C0B6 783 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 SPATA7Q9P0W8 599 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 CLASP1Q7Z460 1538 aa11.05□□□□□ -0.64
EWSR1-216ENST00000479135 BMP3P12645 472 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 ETS1P14921 441 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 HPCAL1P37235 193 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 FBXO36Q8NEA4 188 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 NT5MQ9NPB1 228 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 KLK14Q9P0G3 267 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 TRPV2Q9Y5S1 764 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 ZNF518AQ6AHZ1 1483 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 FFAR3O14843 346 aa11.04□□□□□ -0.64
EWSR1-216ENST00000479135 KHNYNO15037 678 aaKnown RBP11.04□□□□□ -0.64
EWSR1-216ENST00000479135 GPR42O15529 346 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms