RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SLC10A7Q0GE19 358 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 DLG1Q12959 904 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 CTBP1Q13363 440 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 RASIP1Q5U651 963 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 SDHAF4Q5VUM1 108 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 LSMEM2Q8N112 164 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 TOX2Q96NM4 488 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 PANX3Q96QZ0 392 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 GPR62Q9BZJ7 368 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 POPDC3Q9HBV1 291 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 GRID2O43424 1007 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 CD86P42081 329 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 CHRNA4P43681 627 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 TAS2R39P59534 338 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 TAF10Q12962 218 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 KLF10Q13118 480 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 LBRQ14739 615 aaKnown RBP12.31□□□□□ -0.44
PTPRF-212ENST00000477970 GPNMBQ14956 572 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 POLD3Q15054 466 aaPredicted RBP12.31□□□□□ -0.44
PTPRF-212ENST00000477970 ZRSR2Q15696 482 aaKnown RBP12.31□□□□□ -0.44
PTPRF-212ENST00000477970 SMAD1Q15797 465 aaKnown RBP12.31□□□□□ -0.44
PTPRF-212ENST00000477970 SLC9B1Q4ZJI4 515 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 TECRLQ5HYJ1 363 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 FUT10Q6P4F1 479 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 ANKRD33Q7Z3H0 272 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 CILP2Q8IUL8 1156 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 ABI1Q8IZP0 508 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 JADE3Q92613 823 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 ELMO2Q96JJ3 720 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 FAR2Q96K12 515 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 UBXN10Q96LJ8 280 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 XPR1Q9UBH6 696 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 VPS28Q9UK41 221 aa12.31□□□□□ -0.44
PTPRF-212ENST00000477970 NBNO60934 754 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 KRT36O76013 467 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 FGF1P05230 155 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 SLC11A1P49279 550 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 TAF11Q15544 211 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 LRRC26Q2I0M4 334 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 ARL13AQ5H913 290 aaPredicted RBP12.3□□□□□ -0.44
PTPRF-212ENST00000477970 RIPOR1Q6ZS17 1223 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 TMC7Q7Z402 723 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 PGBD5Q8N414 524 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 ATAD1Q8NBU5 361 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 PDZD8Q8NEN9 1154 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 N4BP2L2Q92802 583 aaPredicted RBP12.3□□□□□ -0.44
PTPRF-212ENST00000477970 PSMG2Q969U7 264 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 POLR1EQ9GZS1 481 aaKnown RBP12.3□□□□□ -0.44
PTPRF-212ENST00000477970 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.3□□□□□ -0.44
PTPRF-212ENST00000477970 RBP1P09455 135 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 COX4I1P13073 169 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 IBSPP21815 317 aaPredicted RBP12.3□□□□□ -0.44
PTPRF-212ENST00000477970 USP4Q13107 963 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 ACAP2Q15057 778 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 FAM83EQ2M2I3 478 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 AGAP9Q5VTM2 703 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 RAP1GAP2Q684P5 730 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 NPAS4Q8IUM7 802 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 TTC9BQ8N6N2 239 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 MAPK15Q8TD08 544 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 NXNL1Q96CM4 212 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 SCYL1Q96KG9 808 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 THTPAQ9BU02 230 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 MAGEH1Q9H213 219 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 NCKIPSDQ9NZQ3 722 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 ARHGAP26Q9UNA1 814 aa12.3□□□□□ -0.44
PTPRF-212ENST00000477970 GOLGA8QA0A0J9YX86 632 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 E2F8A0AVK6 867 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 GOLGA8OA6NCC3 632 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 GOLGA8NF8WBI6 632 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 TBX10O75333 385 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 PIGNO95427 931 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 TFEBP19484 476 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 TACR2P21452 398 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 SLC12A2P55011 1212 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 SIRPB2Q5JXA9 342 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 C10orf120Q5SQS8 335 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 NADSYN1Q6IA69 706 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 LRRC74BQ6ZQY2 392 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 ACAD11Q709F0 780 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 RP9Q8TA86 221 aaKnown RBP12.29□□□□□ -0.44
PTPRF-212ENST00000477970 SEPT8Q92599 483 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 CPSF2Q9P2I0 782 aaKnown RBP12.29□□□□□ -0.44
PTPRF-212ENST00000477970 PRPF19Q9UMS4 504 aaKnown RBP12.29□□□□□ -0.44
PTPRF-212ENST00000477970 KIAA1671Q9BY89 1806 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 SLC12A8A0AV02 714 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 TRPC5OSA6NMA1 111 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 SLC38A8A6NNN8 435 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 VGLL3A8MV65 326 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 LDB2O43679 373 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 ZBTB14O43829 449 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 F7P08709 466 aaPredicted RBP12.29□□□□□ -0.44
PTPRF-212ENST00000477970 LTA4HP09960 611 aaKnown RBP12.29□□□□□ -0.44
PTPRF-212ENST00000477970 THRAP10827 490 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 MPSTP25325 297 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 SUOXP51687 545 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 AP2B1P63010 937 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 MXRA7P84157 204 aa12.29□□□□□ -0.44
PTPRF-212ENST00000477970 NFKB2Q00653 900 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms