RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 IFI35P80217 286 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 STARD3Q14849 445 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 CARD16Q5EG05 197 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 DARS2Q6PI48 645 aaKnown RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 PPP1R21Q6ZMI0 780 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 MAMSTRQ6ZN01 415 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 CDKL3Q8IVW4 592 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 PGBD5Q8N414 524 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 GLIS1Q8NBF1 620 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 EPS8L3Q8TE67 593 aaKnown RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 PRCCQ92733 491 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 PSKH2Q96QS6 385 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 IL12RB2Q99665 862 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 SAYSD1Q9NPB0 183 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 SPATA6Q9NWH7 488 aaPredicted RBP17.06■□□□□ 0.32
EPHB4-204ENST00000477446 SEPT10Q9P0V9 454 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 ACTL7BQ9Y614 415 aa17.06■□□□□ 0.32
EPHB4-204ENST00000477446 BCLAF3A2AJT9 711 aaKnown RBP17.05■□□□□ 0.32
EPHB4-204ENST00000477446 PRR33A8MZF0 331 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 ZNF189O75820 626 aaPredicted RBP17.05■□□□□ 0.32
EPHB4-204ENST00000477446 FAM107AO95990 144 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 JCHAINP01591 159 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 ETS1P14921 441 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 AVPR2P30518 371 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 RPL22P35268 128 aaKnown RBP17.05■□□□□ 0.32
EPHB4-204ENST00000477446 RGRP47804 291 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 CXCL12P48061 93 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 DGKEP52429 567 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 SATB1Q01826 763 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 ZBTB17Q13105 803 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 ZNF235Q14590 738 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 RASA2Q15283 850 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 SKIDA1Q1XH10 827 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 ATXN7L2Q5T6C5 722 aaPredicted RBP17.05■□□□□ 0.32
EPHB4-204ENST00000477446 HEATR6Q6AI08 1181 aaKnown RBP17.05■□□□□ 0.32
EPHB4-204ENST00000477446 TTC19Q6DKK2 380 aaPredicted RBP17.05■□□□□ 0.32
EPHB4-204ENST00000477446 DPY19L3Q6ZPD9 716 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 TDRPQ86YL5 185 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 PLPP6Q8IY26 295 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 STK40Q8N2I9 435 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 BBS5Q8N3I7 341 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 OR2AP1Q8NGE2 309 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 UHMK1Q8TAS1 419 aaKnown RBP17.05■□□□□ 0.32
EPHB4-204ENST00000477446 HTR3CQ8WXA8 447 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 EXOC2Q96KP1 924 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 CEP41Q9BYV8 373 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 NT5MQ9NPB1 228 aa17.05■□□□□ 0.32
EPHB4-204ENST00000477446 RBM22Q9NW64 420 aaKnown RBP eCLIP17.05■□□□□ 0.32
EPHB4-204ENST00000477446 KMT2EQ8IZD2 1858 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 GSRP00390 522 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 PTPN3P26045 913 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 RECQLP46063 649 aaPredicted RBP17.04■□□□□ 0.32
EPHB4-204ENST00000477446 CCR3P51677 355 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 COPAP53621 1224 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 SNRPD1P62314 119 aaKnown RBP17.04■□□□□ 0.32
EPHB4-204ENST00000477446 WASHC5Q12768 1159 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 CNTD1Q8N815 330 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 NAT8LQ8N9F0 302 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 CHST14Q8NCH0 376 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 RTP4Q96DX8 246 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 FAM129BQ96TA1 746 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 C1QTNF1Q9BXJ1 281 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 USP29Q9HBJ7 922 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 POLMQ9NP87 494 aaPredicted RBP17.04■□□□□ 0.32
EPHB4-204ENST00000477446 PAK5Q9P286 719 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 HECAQ9UBI9 543 aaPredicted RBP17.04■□□□□ 0.32
EPHB4-204ENST00000477446 FETUBQ9UGM5 382 aa17.04■□□□□ 0.32
EPHB4-204ENST00000477446 TCRBV21S2A2A0A5A6 115 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 KCNN4O15554 427 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 MTSS1O43312 755 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 NEBLO76041 1014 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 HLA-DQB2P05538 268 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 PHBP35232 272 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 CCNHP51946 323 aaPredicted RBP17.03■□□□□ 0.32
EPHB4-204ENST00000477446 MAXP61244 160 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 NSUN2Q08J23 767 aaKnown RBP eCLIP17.03■□□□□ 0.32
EPHB4-204ENST00000477446 ELAVL3Q14576 367 aaKnown RBP17.03■□□□□ 0.32
EPHB4-204ENST00000477446 HIF1AQ16665 826 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 LONRF1Q17RB8 773 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 TEX44Q53QW1 395 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 TMEM31Q5JXX7 168 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 MICALCLQ6ZW33 695 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 PRUNE1Q86TP1 453 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 DTWD2Q8NBA8 298 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 OR6K2Q8NGY2 324 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 OR2T3Q8NH03 318 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 CPT1BQ92523 772 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 HHIPQ96QV1 700 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 CCT8L2Q96SF2 557 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 MGME1Q9BQP7 344 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 MKRN2Q9H000 416 aaKnown RBP17.03■□□□□ 0.32
EPHB4-204ENST00000477446 LRRC4CQ9HCJ2 640 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 RSPH14Q9UHP6 348 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 CACNA1IQ9P0X4 2223 aa17.03■□□□□ 0.32
EPHB4-204ENST00000477446 TTC24A2A3L6 582 aaPredicted RBP17.02■□□□□ 0.32
EPHB4-204ENST00000477446 SMIM23A6NLE4 172 aa17.02■□□□□ 0.32
EPHB4-204ENST00000477446 E7ESA3 106 aa17.02■□□□□ 0.32
EPHB4-204ENST00000477446 RNF103O00237 685 aa17.02■□□□□ 0.32
EPHB4-204ENST00000477446 GJB3O75712 270 aa17.02■□□□□ 0.32
EPHB4-204ENST00000477446 PAPSS2O95340 614 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms