RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZNF365Q70YC5 407 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ASCL5Q7RTU5 278 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ARMC9Q7Z3E5 817 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 IQCHQ86VS3 1027 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 LDHDQ86WU2 507 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 C4orf19Q8IY42 314 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TBC1D3Q8IZP1 549 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SPARTQ8N0X7 666 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 FAM133AQ8N9E0 248 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TC2NQ8N9U0 490 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 FAM184AQ8NB25 1140 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 C11orf65Q8NCR3 313 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 RBM15BQ8NDT2 890 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 OR7G3Q8NG95 312 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 NEDD1Q8NHV4 660 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 OVCA2Q8WZ82 227 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 MOAP1Q96BY2 351 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 MIEF2Q96C03 454 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SPACA9Q96E40 222 aaPredicted RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 C5orf30Q96GV9 206 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 INTS4Q96HW7 963 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 HES6Q96HZ4 224 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 EPSTI1Q96J88 318 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 KLHL15Q96M94 604 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 RBM14Q96PK6 669 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 EIF3CQ99613 913 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SSX3Q99909 188 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CARD6Q9BX69 1037 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SLC46A2Q9BY10 475 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TRIM7Q9C029 511 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF350Q9GZX5 532 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 LDAHQ9H6V9 325 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CRLF2Q9HC73 371 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF304Q9HCX3 659 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GCM1Q9NP62 436 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 TLR9Q9NR96 1032 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 FBXO34Q9NWN3 711 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CHCHD3Q9NX63 227 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GDAP2Q9NXN4 497 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 ERAP1Q9NZ08 941 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 GDE1Q9NZC3 331 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 IL1RAPL1Q9NZN1 696 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 OGFRQ9NZT2 677 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CNIH4Q9P003 139 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SH3BP4Q9P0V3 963 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 DLGAP2Q9P1A6 1054 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 DNMT3BQ9UBC3 853 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 DDX25Q9UHL0 483 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 FBXW2Q9UKT8 454 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 MTUS1Q9ULD2 1270 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PALD1Q9ULE6 856 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SNX6Q9UNH7 406 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 KCNK7Q9Y2U2 307 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 STRAPQ9Y3F4 350 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CHTOPQ9Y3Y2 248 aaKnown RBP2.95□□□□□ -1.94
HMGN4-202ENST00000477243 PCDHA10Q9Y5I2 948 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 CDY1Q9Y6F8 540 aa2.95□□□□□ -1.94
HMGN4-202ENST00000477243 SPATA31A5Q5VU36 1347 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 NPHP3Q7Z494 1330 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SPATA31A7Q8IWB4 1347 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 A0A087WV48 116 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TRBV2A0A0J9YWF9 115 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 EDDM13A0A1B0GTR0 161 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FAM95CA0A1B0GW59 222 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 A0A1B0GWJ7 208 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CDC14CA4D256 554 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF785A8K8V0 405 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 H0Y8G0 127 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 M0QYG6 137 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 EBAG9O00559 213 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ADAMDEC1O15204 470 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CLDN3O15551 220 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PRICKLE3O43900 615 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CYTIPO60759 359 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TADA2AO75478 443 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ITGA10O75578 1167 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 IPO13O94829 963 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 RHOBTB1O94844 696 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 WISP1O95388 367 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 DDAH2O95865 285 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ONECUT2O95948 504 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PAHP00439 452 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PLGP00747 810 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 MT-ATP6P00846 226 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 AVPP01185 164 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 GBAP04062 536 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 KRT8P05787 483 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 S100A9P06702 114 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ASGR1P07306 291 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 VIMP08670 466 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 FAM87AP0C7U9 286 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CTPS1P17812 591 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TRIM21P19474 475 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 MYF6P23409 242 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 GLRA2P23416 452 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 AHCYP23526 432 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 PAX7P23759 505 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 TNFRSF8P28908 595 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms