RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 TRIT1Q9H3H1 467 aaKnown RBP4.86□□□□□ -1.63
USP4-209ENST00000475873 ACTL8Q9H568 366 aa4.86□□□□□ -1.63
USP4-209ENST00000475873 MRPL44Q9H9J2 332 aaKnown RBP4.86□□□□□ -1.63
USP4-209ENST00000475873 FGF22Q9HCT0 170 aa4.86□□□□□ -1.63
USP4-209ENST00000475873 CHST11Q9NPF2 352 aa4.86□□□□□ -1.63
USP4-209ENST00000475873 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.86□□□□□ -1.63
USP4-209ENST00000475873 FBXO8Q9NRD0 319 aa4.86□□□□□ -1.63
USP4-209ENST00000475873 PDRG1Q9NUG6 133 aa4.86□□□□□ -1.63
USP4-209ENST00000475873 SPATS2LQ9NUQ6 558 aaKnown RBP4.86□□□□□ -1.63
USP4-209ENST00000475873 HS3ST2Q9Y278 367 aa4.86□□□□□ -1.63
USP4-209ENST00000475873 PCDHGA10Q9Y5H3 936 aa4.86□□□□□ -1.63
USP4-209ENST00000475873 CSAG2Q9Y5P2 127 aa4.86□□□□□ -1.63
USP4-209ENST00000475873 COPG1Q9Y678 874 aaKnown RBP4.86□□□□□ -1.63
USP4-209ENST00000475873 SEC16AO15027 2179 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 HIVEP2P31629 2446 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 SVEP1Q4LDE5 3571 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 TMEM202A6NGA9 273 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 A8MU76 341 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 F5H423 210 aaPredicted RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 M0QYT0 321 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 AREL1O15033 823 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 GCNT3O95395 438 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 MOCS3O95396 460 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 RECKO95980 971 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 FGF1P05230 155 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 KRT18P05783 430 aaKnown RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 FYNP06241 537 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 CTSEP14091 401 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 DNAJA1P31689 397 aaKnown RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 GKP32189 559 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 NNMTP40261 264 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 SLC11A2P49281 568 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 CENPCQ03188 943 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 Q0VFX4 171 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 SGCGQ13326 291 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 TRPC3Q13507 836 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 NCOA4Q13772 614 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 SURF1Q15526 300 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 SNRNP35Q16560 246 aaKnown RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 CLPPQ16740 277 aaPredicted RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 UGT8Q16880 541 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 WSCD2Q2TBF2 565 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 VWA2Q5GFL6 755 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 BMP2KLQ5H9B9 411 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 RAP1GAP2Q684P5 730 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 PLEKHA7Q6IQ23 1121 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 ENPP7Q6UWV6 458 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 CEACAM20Q6UY09 585 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 TAF8Q7Z7C8 310 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 MRGPRGQ86SM5 289 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 SLC47A2Q86VL8 602 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 UNC93AQ86WB7 457 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 ZNF761Q86XN6 746 aaPredicted RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 RHOT1Q8IXI2 618 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 PHC2Q8IXK0 858 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 CCAR2Q8N163 923 aaKnown RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 ARHGAP18Q8N392 663 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 TMC2Q8TDI7 906 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 ADAMTS17Q8TE56 1095 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 TATDN2Q93075 761 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 AZIN2Q96A70 460 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 PRMT1Q99873 361 aaKnown RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 FEM1AQ9BSK4 669 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 ULBP3Q9BZM4 244 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 TM6SF1Q9BZW5 370 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 ZSCAN16Q9H4T2 348 aaPredicted RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 APOBEC3GQ9HC16 384 aaKnown RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 ZBTB20Q9HC78 741 aaPredicted RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 OLA1Q9NTK5 396 aaKnown RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 AJAP1Q9UKB5 411 aaPredicted RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 EXOC7Q9UPT5 735 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 B3GNT3Q9Y2A9 372 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 PLEKHM1Q9Y4G2 1056 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 OR1A2Q9Y585 309 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 PCDHGB7Q9Y5F8 929 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 DGKBQ9Y6T7 804 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 SPTBP11277 2137 aa4.85□□□□□ -1.63
USP4-209ENST00000475873 INTS1Q8N201 2190 aaKnown RBP4.85□□□□□ -1.63
USP4-209ENST00000475873 MEGF8Q7Z7M0 2845 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 A6NL46 340 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 LRRIQ3A6PVS8 624 aaPredicted RBP4.84□□□□□ -1.63
USP4-209ENST00000475873 ZNF185O15231 689 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 SPTLC2O15270 562 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 INPP4BO15327 924 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 TGFB1I1O43294 461 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 SLC26A4O43511 780 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 STX6O43752 255 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 MMP20O60882 483 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 KIAA0754O94854 1291 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 ENDOD1O94919 500 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 TIAF1O95411 115 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 ECEL1O95672 775 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 MOCS2O96007 188 aaPredicted RBP4.84□□□□□ -1.63
USP4-209ENST00000475873 FUCA1P04066 466 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 PRNPP04156 253 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 FOSL1P15407 271 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 TACR2P21452 398 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 L1CAMP32004 1257 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 CA5AP35218 305 aa4.84□□□□□ -1.63
USP4-209ENST00000475873 BLKP51451 505 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms