RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ASB12Q8WXK4 309 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 CNDP2Q96KP4 475 aaKnown RBP18.11■□□□□ 0.49
UPF3A-203ENST00000474056 ZNF641Q96N77 438 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-203ENST00000474056 TUBGCP5Q96RT8 1024 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 WRAP53Q9BUR4 548 aaKnown RBP18.11■□□□□ 0.49
UPF3A-203ENST00000474056 NHEJ1Q9H9Q4 299 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-203ENST00000474056 KLHL11Q9NVR0 708 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 COQ6Q9Y2Z9 468 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 IGF2RP11717 2491 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 WDFY3Q8IZQ1 3526 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 USP24Q9UPU5 2620 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 FAM221BA6H8Z2 402 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 ENC1O14682 589 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 FPGTO14772 594 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 MAFKO60675 156 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 TM7SF2O76062 418 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 LDOC1O95751 146 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-203ENST00000474056 PEX11BO96011 259 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 PRKCGP05129 697 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 SERPINB6P35237 376 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 IGFALSP35858 605 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 SCNN1BP51168 640 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 ELP6Q0PNE2 266 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 TBX2Q13207 712 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-203ENST00000474056 DNAJC3Q13217 504 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 DPYSL3Q14195 570 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 ST3GAL2Q16842 350 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 TMEM52BQ4KMG9 183 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 CCDC157Q569K6 752 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 ZNF542PQ5EBM4 170 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 TPRG1LQ5T0D9 272 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 BRAT1Q6PJG6 821 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 SARM1Q6SZW1 724 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 ATPAF2Q8N5M1 289 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 CENPTQ96BT3 561 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 CCDC42Q96M95 316 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 ZNF599Q96NL3 588 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 ATP13A3Q9H7F0 1226 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 PCDH12Q9NPG4 1184 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 UCKL1Q9NWZ5 548 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 RCOR3Q9P2K3 495 aaPredicted RBP18.1■□□□□ 0.49
UPF3A-203ENST00000474056 SEPT3Q9UH03 358 aa18.1■□□□□ 0.49
UPF3A-203ENST00000474056 TTC24A2A3L6 582 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-203ENST00000474056 TMEM110-MUSTN1A8MSY1 372 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 AKR1B15C9JRZ8 316 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-203ENST00000474056 MFSD11O43934 449 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 SERPINA4P29622 427 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 RABIFP47224 123 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 RENBPP51606 427 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 SUOXP51687 545 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 SEMG2Q02383 582 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 BCL2L1Q07817 233 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 NSUN2Q08J23 767 aaKnown RBP eCLIP18.09■□□□□ 0.49
UPF3A-203ENST00000474056 PDE1CQ14123 709 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-203ENST00000474056 FZD2Q14332 565 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 ZNF235Q14590 738 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 CFAP58Q5T655 872 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 NCBP2-AS2Q69YL0 99 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 DCP2Q8IU60 420 aaKnown RBP18.09■□□□□ 0.49
UPF3A-203ENST00000474056 CNGA4Q8IV77 575 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 SLC25A45Q8N413 288 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 PGBD5Q8N414 524 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 TP53I13Q8NBR0 393 aaPredicted RBP18.09■□□□□ 0.49
UPF3A-203ENST00000474056 PSKH2Q96QS6 385 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 TRIM5Q9C035 493 aa18.09■□□□□ 0.49
UPF3A-203ENST00000474056 MBNL1Q9NR56 388 aaKnown RBP18.09■□□□□ 0.49
UPF3A-203ENST00000474056 SPTY2D1-AS1A0A0U1RR47 76 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 TRAFD1O14545 582 aaPredicted RBP18.08■□□□□ 0.48
UPF3A-203ENST00000474056 RIOK3O14730 519 aaKnown RBP18.08■□□□□ 0.48
UPF3A-203ENST00000474056 PIAS2O75928 621 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 PROS1P07225 676 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 DGKAP23743 735 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 MMP12P39900 470 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 PFN3P60673 137 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 MESDQ14696 234 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 PCDH19Q8TAB3 1148 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 SLC35G2Q8TBE7 412 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 ECHDC3Q96DC8 303 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 IFT43Q96FT9 208 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 ZNF670Q9BS34 389 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 DNAJC28Q9NX36 388 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 ATP8A1Q9Y2Q0 1164 aa18.08■□□□□ 0.48
UPF3A-203ENST00000474056 MAP3K6O95382 1288 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 C6P13671 934 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 CR2P20023 1033 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 MAN1A1P33908 653 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 ACADVLP49748 655 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 MAXP61244 160 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 AP1S1P61966 158 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 IRF4Q15306 451 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 ANKRD20A8PQ5CZ79 823 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 ERAP2Q6P179 960 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 DHRS13Q6UX07 377 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 TMPRSS7Q7RTY8 843 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 PARGQ86W56 976 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 KCTD6Q8NC69 237 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 MGME1Q9BQP7 344 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 LCMT1Q9UIC8 334 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 KLF15Q9UIH9 416 aa18.07■□□□□ 0.48
UPF3A-203ENST00000474056 ASXL3Q9C0F0 2248 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms