RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 LDB1Q86U70 411 aaPredicted RBP18.15■□□□□ 0.5
VARS2-206ENST00000473916 CMTM8Q8IZV2 173 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 ACMSDQ8TDX5 336 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 USP13Q92995 863 aaPredicted RBP18.15■□□□□ 0.5
VARS2-206ENST00000473916 ISL2Q96A47 359 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 ZSWIM3Q96MP5 696 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 PRKD2Q9BZL6 878 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 SUDS3Q9H7L9 328 aaPredicted RBP18.15■□□□□ 0.5
VARS2-206ENST00000473916 ARHGAP26Q9UNA1 814 aa18.15■□□□□ 0.5
VARS2-206ENST00000473916 A0A0U1RQS6 177 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 CD70P32970 193 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 AVPR1AP37288 418 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 SERPINB8P50452 374 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 LMAN2Q12907 356 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 ZNF460Q14592 562 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 ZNF783Q6ZMS7 281 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 GRASPQ7Z6J2 395 aaPredicted RBP18.14■□□□□ 0.49
VARS2-206ENST00000473916 SLC41A1Q8IVJ1 513 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 ING5Q8WYH8 240 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 DNAJC1Q96KC8 554 aaKnown RBP18.14■□□□□ 0.49
VARS2-206ENST00000473916 GPR22Q99680 433 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 TDRD1Q9BXT4 1180 aaKnown RBP18.14■□□□□ 0.49
VARS2-206ENST00000473916 ZNF395Q9H8N7 513 aaPredicted RBP18.14■□□□□ 0.49
VARS2-206ENST00000473916 FBXO6Q9NRD1 293 aaPredicted RBP18.14■□□□□ 0.49
VARS2-206ENST00000473916 TMEM216Q9P0N5 145 aa18.14■□□□□ 0.49
VARS2-206ENST00000473916 RRP15Q9Y3B9 282 aaKnown RBP18.14■□□□□ 0.49
VARS2-206ENST00000473916 PHGDHO43175 533 aaKnown RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 SMAD6O43541 496 aaKnown RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 NDST3O95803 873 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 FGF1P05230 155 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 PTPN2P17706 415 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 HLA-DPA1P20036 260 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 PBX2P40425 430 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 UBE3AQ05086 875 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 THOC5Q13769 683 aaKnown RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 RNF187Q5TA31 235 aaPredicted RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 NEPROQ6NW34 567 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 PTAR1Q7Z6K3 402 aaPredicted RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 CPXM2Q8N436 756 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 C2CD4AQ8NCU7 369 aaPredicted RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 OR13C4Q8NGS5 318 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 OR6K2Q8NGY2 324 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 HDAC10Q969S8 669 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 RMDN2Q96LZ7 410 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 TM6SF2Q9BZW4 377 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 MTIF3Q9H2K0 278 aaKnown RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 RHOJQ9H4E5 214 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 ABCF3Q9NUQ8 709 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.13■□□□□ 0.49
VARS2-206ENST00000473916 MARCH4Q9P2E8 410 aaPredicted RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 YBX2Q9Y2T7 364 aaKnown RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 RWDD3Q9Y3V2 267 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 SZT2Q5T011 3432 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 A0A096LPK6 155 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 HGSO14964 777 aaPredicted RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 TIMM44O43615 452 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 SIN3BO75182 1162 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 HAUS5O94927 633 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 NEFHP12036 1026 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 PAMP19021 973 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 TRAF2Q12933 501 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 CBX2Q14781 532 aaPredicted RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 SHHQ15465 462 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 ZCCHC23Q6ZST2 131 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 SRLQ86TD4 932 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 NUDCD1Q96RS6 583 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 GGA2Q9UJY4 613 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 FBXO5Q9UKT4 447 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 INTS6Q9UL03 887 aaKnown RBP18.13■□□□□ 0.49
VARS2-206ENST00000473916 RAI2Q9Y5P3 530 aa18.13■□□□□ 0.49
VARS2-206ENST00000473916 PLIN3O60664 434 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 GLRA3O75311 464 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 SLC4A1P02730 911 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 C2P06681 752 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 ITIH4Q14624 930 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 FYB2Q5VWT5 728 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 CNSTQ6PJW8 725 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 TMEM25Q86YD3 366 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 CEP97Q8IW35 865 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 C12orf76Q8N812 135 aaPredicted RBP18.12■□□□□ 0.49
VARS2-206ENST00000473916 DCAF4L2Q8NA75 395 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 LPCAT1Q8NF37 534 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 OR6P1Q8NGX9 317 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 PDCD6IPQ8WUM4 868 aaKnown RBP18.12■□□□□ 0.49
VARS2-206ENST00000473916 RMDN1Q96DB5 314 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 TBATAQ96M53 351 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 STARD13Q9Y3M8 1113 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 C2orf16Q68DN1 1984 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 MYO9BQ13459 2157 aa18.12■□□□□ 0.49
VARS2-206ENST00000473916 DNAJC6O75061 913 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 EPOP01588 193 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 PROCP04070 461 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 BPGMP07738 259 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 SLC8A1P32418 973 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 CTSOP43234 321 aaPredicted RBP18.11■□□□□ 0.49
VARS2-206ENST00000473916 CSRP3P50461 194 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 RHOAP61586 193 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 CHI3L2Q15782 390 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 MPPE1Q53F39 396 aa18.11■□□□□ 0.49
VARS2-206ENST00000473916 PRSS36Q5K4E3 855 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms