RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 BBS4Q96RK4 519 aa15.17■□□□□ 0.02
LIMS2-213ENST00000469300 CCT7Q99832 543 aa15.17■□□□□ 0.02
LIMS2-213ENST00000469300 SLC25A51Q9H1U9 297 aa15.17■□□□□ 0.02
LIMS2-213ENST00000469300 PHPT1Q9NRX4 125 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-213ENST00000469300 RPS6KB2Q9UBS0 482 aa15.17■□□□□ 0.02
LIMS2-213ENST00000469300 MRPL42Q9Y6G3 142 aaKnown RBP15.17■□□□□ 0.02
LIMS2-213ENST00000469300 FCHO1O14526 889 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 SEC24DO94855 1032 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 ITGA2BP08514 1039 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 S100A3P33764 101 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 ALDH9A1P49189 494 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 CCDC157Q569K6 752 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 GDF6Q6KF10 455 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 TAC4Q86UU9 113 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 PIWIL2Q8TC59 973 aaKnown RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 UNKQ9C0B0 810 aaKnown RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 DDX3YO15523 660 aaKnown RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 SLC35G4P0C7Q5 338 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 RAD23AP54725 363 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 DEFA1P59665 94 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 DEFA3P59666 94 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 PLIN5Q00G26 463 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 AUHQ13825 339 aaKnown RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 ADRM1Q16186 407 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 PFKFB4Q16877 469 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 HLA-DQA1Q5Y7H0 255 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 SELENOMQ8WWX9 145 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 OXNAD1Q96HP4 312 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 KCTD15Q96SI1 283 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 TRMOQ9BU70 441 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 SAR1AQ9NR31 198 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 TMPRSS4Q9NRS4 437 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 HECAQ9UBI9 543 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 URADA6NGE7 173 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 BIRC5O15392 142 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 LRIG2O94898 1065 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 AMD1P17707 334 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 TLX1P31314 330 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 ASPAP45381 313 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 NAGLUP54802 743 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 PTGR2Q8N8N7 351 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 RTL3Q8N8U3 475 aaKnown RBP15.16■□□□□ 0.02
LIMS2-213ENST00000469300 NTAN1Q96AB6 310 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 DCLRE1BQ9H816 532 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 ZFYVE1Q9HBF4 777 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 ENTPD4Q9Y227 616 aa15.16■□□□□ 0.02
LIMS2-213ENST00000469300 PRMT5O14744 637 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 NRP1O14786 923 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 PAPSS1O43252 624 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 PSMA3P25788 255 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 SOX11P35716 441 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 CAPZA2P47755 286 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 CRADDP78560 199 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 GAD2Q05329 585 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 GET4Q7L5D6 327 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 CFAP52Q8N1V2 620 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 PPP3R2Q96LZ3 170 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 NSMCE2Q96MF7 247 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 KLHL5Q96PQ7 755 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 ZDHHC4Q9NPG8 344 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 ARHGEF4Q9NR80 690 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 AASDHPPTQ9NRN7 309 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 VWA7Q9Y334 891 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 KCNE2Q9Y6J6 123 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 MAP2K7O14733 419 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 BUD23O43709 281 aaKnown RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 SLC25A14O95258 325 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 NME5P56597 212 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 GNA13Q14344 377 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 SLC35G1Q2M3R5 365 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 IL27RAQ6UWB1 636 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 TMEM132CQ8N3T6 1108 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 ZNF398Q8TD17 642 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 WFIKKN2Q8TEU8 576 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 MMADHCQ9H3L0 296 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 CAPN10Q9HC96 672 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 CACNA2D2Q9NY47 1150 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 FBXW11Q9UKB1 542 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 ERVW-1Q9UQF0 538 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 CCDC154A6NI56 674 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 MATN3O15232 486 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 PLK1P53350 603 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 IL10RBQ08334 325 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 SOWAHAQ2M3V2 549 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 KLHL35Q6PF15 583 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 PAGE2Q7Z2X7 111 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 SLC41A1Q8IVJ1 513 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 GALNT4Q8N4A0 578 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 CKAP2Q8WWK9 683 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 MCRS1Q96EZ8 462 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 SCLYQ96I15 445 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 HAPLN3Q96S86 360 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 ACE2Q9BYF1 805 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 ENOPH1Q9UHY7 261 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 CPQQ9Y646 472 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 TLL2Q9Y6L7 1015 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 MRASO14807 208 aa15.15■□□□□ 0.02
LIMS2-213ENST00000469300 POP4O95707 220 aaKnown RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 SNAI1O95863 264 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-213ENST00000469300 COL6A2P12110 1019 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms