RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PRLRP16471 622 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 SERPINA4P29622 427 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 NSUN2Q08J23 767 aaKnown RBP eCLIP11.98□□□□□ -0.49
APTX-213ENST00000465003 GALNT3Q14435 633 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 TCEAL6Q6IPX3 200 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 USP30Q70CQ3 517 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 BZW1Q7L1Q6 419 aaKnown RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 ASCL5Q7RTU5 278 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 PRPF39Q86UA1 669 aaKnown RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 PLPP6Q8IY26 295 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 RGL4Q8IZJ4 473 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 SLC35B2Q8TB61 432 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 TCEAL3Q969E4 200 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 BIRC7Q96CA5 298 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 GORASP1Q9BQQ3 440 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 CPEB1Q9BZB8 566 aaKnown RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 USP29Q9HBJ7 922 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 EIF2B4Q9UI10 523 aaKnown RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 ZKSCAN5Q9Y2L8 839 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 COQ6Q9Y2Z9 468 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 RAI2Q9Y5P3 530 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 TNRC6BQ9UPQ9 1833 aaKnown RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 MEI4A8MW99 385 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 NEMP1O14524 444 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 PMPCBO75439 489 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 IFNB1P01574 187 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 ZSCAN5DPP0CG00 497 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 TIMP2P16035 220 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 PSMB4P28070 264 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 AP1S1P61966 158 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 FAM193AP78312 1265 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 ELF2Q15723 593 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 UGP2Q16851 508 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 LPCAT2Q7L5N7 544 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 CDKL3Q8IVW4 592 aaPredicted RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 OXNAD1Q96HP4 312 aaPredicted RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 TEKT5Q96M29 485 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 HINFPQ9BQA5 517 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 ARRDC1-AS1Q9H2J1 176 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 GLOD4Q9HC38 313 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 PCDH12Q9NPG4 1184 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 RSPH14Q9UHP6 348 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 FZD4Q9ULV1 537 aa11.98□□□□□ -0.49
APTX-213ENST00000465003 ZFR2Q9UPR6 939 aaKnown RBP11.98□□□□□ -0.49
APTX-213ENST00000465003 LRRK1Q38SD2 2015 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 TRPM6Q9BX84 2022 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 DCHS1Q96JQ0 3298 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 HACD1B0YJ81 288 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 WNT9AO14904 365 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 IGHV4-34P06331 123 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 PIRTP0C851 137 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 HSPA9P38646 679 aaKnown RBP11.97□□□□□ -0.49
APTX-213ENST00000465003 SKOR1P84550 965 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 XRCC4Q13426 336 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 BYSLQ13895 437 aaKnown RBP11.97□□□□□ -0.49
APTX-213ENST00000465003 ANKRD20A2Q5SQ80 823 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 ANKRD20A1Q5TYW2 823 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 ANKRD20A3Q5VUR7 823 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 PRELID2Q8N945 189 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 LPCAT1Q8NF37 534 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 PIGKQ92643 395 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 NKD2Q969F2 451 aaPredicted RBP11.97□□□□□ -0.49
APTX-213ENST00000465003 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 TDRD1Q9BXT4 1180 aaKnown RBP11.97□□□□□ -0.49
APTX-213ENST00000465003 OSBPL1AQ9BXW6 950 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 CAAP1Q9H8G2 361 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 PIH1D1Q9NWS0 290 aaKnown RBP11.97□□□□□ -0.49
APTX-213ENST00000465003 SCML1Q9UN30 329 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 ZNF148Q9UQR1 794 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.97□□□□□ -0.49
APTX-213ENST00000465003 FADS3Q9Y5Q0 445 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 RALGAPA1Q6GYQ0 2036 aa11.97□□□□□ -0.49
APTX-213ENST00000465003 ADAMTS9Q9P2N4 1935 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 A0A1W2PQU0 124 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 CTAGE9A4FU28 777 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 UPK3BL1B0FP48 263 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 UPK3BL2E5RIL1 263 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 SLC31A1O15431 190 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 MMP20O60882 483 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 PRLP01236 227 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 LMNAP02545 664 aaKnown RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 SLC4A1P02730 911 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 SERPINF2P08697 491 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 XPAP23025 273 aaPredicted RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 MSNP26038 577 aaKnown RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 OXTRP30559 389 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 CNR2P34972 360 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 CHRNA4P43681 627 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 CSNK1DP48730 415 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 FGL2Q14314 439 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 SPARCL1Q14515 664 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 TRIP13Q15645 432 aaPredicted RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 OASLQ15646 514 aaKnown RBP11.96□□□□□ -0.49
APTX-213ENST00000465003 LYSMD4Q5XG99 296 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 ALG1LQ6GMV1 187 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 TTC27Q6P3X3 843 aa11.96□□□□□ -0.49
APTX-213ENST00000465003 MTERF4Q7Z6M4 381 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms