RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 TIPINQ9BVW5 301 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 LRRC27Q9C0I9 530 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 NXF3Q9H4D5 531 aaKnown RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 RMND1Q9NWS8 449 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 TAB2Q9NYJ8 693 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 MOCS1Q9NZB8 636 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 SEL1LQ9UBV2 794 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 TESQ9UGI8 421 aaKnown RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 RWDD2AQ9UIY3 292 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 INTUQ9ULD6 942 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 TRAF3IP3Q9Y228 551 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 PIN4Q9Y237 131 aaKnown RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 PCDHGA5Q9Y5G8 931 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 NOX1Q9Y5S8 564 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 STYXL1Q9Y6J8 313 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 IGF2RP11717 2491 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 DOCK8Q8NF50 2099 aa3.84□□□□□ -1.8
SCFD1-204ENST00000463622 NBEAQ8NFP9 2946 aa3.84□□□□□ -1.8
SCFD1-204ENST00000463622 MYH11P35749 1972 aa3.84□□□□□ -1.8
SCFD1-204ENST00000463622 A0A0B4J269 797 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 K7ERI5 159 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ACKR2O00590 384 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PPEF2O14830 753 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 HNRNPDLO14979 420 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 EPHB6O15197 1021 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ADAM12O43184 909 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 TEX33O43247 280 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 EPN2O95208 641 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 TOP3BO95985 862 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CPEP16870 476 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NR2F2P24468 414 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 OR1G1P47890 313 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 SLC5A3P53794 718 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 MYL5Q02045 173 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 GOLGA8FQ08AF8 430 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 GOLGA8DPQ0D2H9 430 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 MXD4Q14582 209 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 KRT31Q15323 416 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 FAM187BQ17R55 369 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ANO4Q32M45 955 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 SPDYE7PQ495Y7 208 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 AASDHQ4L235 1098 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PPM1LQ5SGD2 360 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ATF7IP2Q5U623 682 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 SPATA1Q5VX52 437 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 FUT10Q6P4F1 479 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PRSS55Q6UWB4 352 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CATSPER4Q7RTX7 472 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 SRGAP1Q7Z6B7 1085 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 EFCAB13Q8IY85 973 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CSGALNACT2Q8N6G5 542 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 OR5B17Q8NGF7 314 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NTN5Q8WTR8 489 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NOC3LQ8WTT2 800 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NRG4Q8WWG1 115 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NACC2Q96BF6 587 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 MCRS1Q96EZ8 462 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 DHTKD1Q96HY7 919 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 B3GALT6Q96L58 329 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 IFT74Q96LB3 600 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CNOT6LQ96LI5 555 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 SCLT1Q96NL6 688 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 GAD1Q99259 594 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 BPIFA3Q9BQP9 254 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 TRMT61BQ9BVS5 477 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NFKBIZQ9BYH8 718 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ARRDC1-AS1Q9H2J1 176 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 GSTO2Q9H4Y5 243 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 C17orf75Q9HAS0 396 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 TRPV4Q9HBA0 871 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF334Q9HCZ1 680 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM140Q9NV12 185 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 HOOK1Q9UJC3 728 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 GPR45Q9Y5Y3 372 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 BPTFQ12830 3046 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 UBE4BO95155 1302 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 A0A1B0GUA9 196 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ARHGEF37A1IGU5 675 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 LRRIQ3A6PVS8 624 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PDXKO00764 312 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PSMA7O14818 248 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 KIAA0391O15091 583 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CCL16O15467 120 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 LETM1O95202 739 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 GPANK1O95872 356 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CXCL8P10145 99 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CEACAM1P13688 526 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 TYRP1P17643 537 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CSRP1P21291 193 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 AKAP5P24588 427 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 HOXC13P31276 330 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CXCR5P32302 372 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 MPLP40238 635 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 AVPR1BP47901 424 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 LIG4P49917 911 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NOMO3P69849 1222 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CXADRP78310 365 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 POU5F1BQ06416 359 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms