RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NUDT1P36639 197 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 MAPK8P45983 427 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 COPS2P61201 443 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 NIPAL4Q0D2K0 466 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 GRIK2Q13002 908 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 ZBTB17Q13105 803 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 PDK1Q15118 436 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 RALGPS1Q5JS13 557 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 KAZNQ674X7 775 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 TIGD7Q6NT04 549 aaPredicted RBP17.85■□□□□ 0.45
VPS52-214ENST00000463486 AADACL2Q6P093 401 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 BRAT1Q6PJG6 821 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 B4GALNT4Q76KP1 1039 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 PRPF39Q86UA1 669 aaKnown RBP17.85■□□□□ 0.45
VPS52-214ENST00000463486 ASCC3Q8N3C0 2202 aaKnown RBP17.85■□□□□ 0.45
VPS52-214ENST00000463486 TMEM145Q8NBT3 493 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 CCNYQ8ND76 341 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 OR2I1PQ8NGU4 316 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 KLK6Q92876 244 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 HES6Q96HZ4 224 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 SERAC1Q96JX3 654 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 TRPM6Q9BX84 2022 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 HEMGNQ9BXL5 484 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 RBM22Q9NW64 420 aaKnown RBP eCLIP17.85■□□□□ 0.45
VPS52-214ENST00000463486 AMACRQ9UHK6 382 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 PACSIN2Q9UNF0 486 aaPredicted RBP17.85■□□□□ 0.45
VPS52-214ENST00000463486 EFR3BQ9Y2G0 817 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 PCDHGC4Q9Y5F7 938 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 SPTBN2O15020 2390 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 CABIN1Q9Y6J0 2220 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.84■□□□□ 0.45
VPS52-214ENST00000463486 C4orf47A7E2U8 309 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 RIOK3O14730 519 aaKnown RBP17.84■□□□□ 0.45
VPS52-214ENST00000463486 VILLO15195 856 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 FZD6O60353 706 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 PCDH8O95206 1070 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 JCHAINP01591 159 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 HLA-DQB2P05538 268 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 PRLRP16471 622 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 TGM2P21980 687 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 SERPINA4P29622 427 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 CTSKP43235 329 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 SUOXP51687 545 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 RWDD2BP57060 319 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 RPS21P63220 83 aaKnown RBP17.84■□□□□ 0.45
VPS52-214ENST00000463486 BCL2L1Q07817 233 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 TRAF2Q12933 501 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 PRKD1Q15139 912 aaPredicted RBP17.84■□□□□ 0.45
VPS52-214ENST00000463486 KIF19Q2TAC6 998 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 TMEM52BQ4KMG9 183 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 NAPEPLDQ6IQ20 393 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 KIAA1161Q6NSJ0 714 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 NSMCE1Q8WV22 266 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 ASB12Q8WXK4 309 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 FEM1CQ96JP0 617 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 KLF6Q99612 283 aaPredicted RBP17.84■□□□□ 0.45
VPS52-214ENST00000463486 SEMA3CQ99985 751 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 SLC17A9Q9BYT1 436 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 BRD8Q9H0E9 1235 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 PCDH12Q9NPG4 1184 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 AMFRQ9UKV5 643 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 GUCA1BQ9UMX6 200 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 CA5BQ9Y2D0 317 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 ANKRD6Q9Y2G4 727 aa17.84■□□□□ 0.45
VPS52-214ENST00000463486 ANKRD36A6QL64 1941 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 IGLON5A6NGN9 336 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 UPK3BL1B0FP48 263 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 UPK3BL2E5RIL1 263 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 RAD51BO15315 384 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 SLC31A1O15431 190 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 SOCS5O75159 536 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 PRKCGP05129 697 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 MMP2P08253 660 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 CCDC175P0C221 793 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 CD38P28907 300 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 SETMARQ53H47 684 aaPredicted RBP17.83■□□□□ 0.44
VPS52-214ENST00000463486 ODF2Q5BJF6 829 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 PEX26Q7Z412 305 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 CCDC50Q8IVM0 306 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 SYCE1Q8N0S2 351 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 BBS5Q8N3I7 341 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 MINDY1Q8N5J2 469 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 OSBPL8Q9BZF1 889 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 TSGA10Q9BZW7 698 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 ZDHHC5Q9C0B5 715 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 POLR1EQ9GZS1 481 aaKnown RBP17.83■□□□□ 0.44
VPS52-214ENST00000463486 KCNF1Q9H3M0 494 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 IL21RQ9HBE5 538 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 TMEM9BQ9NQ34 198 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 SCUBE2Q9NQ36 999 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 DNAAF2Q9NVR5 837 aaKnown RBP17.83■□□□□ 0.44
VPS52-214ENST00000463486 SNX11Q9Y5W9 270 aa17.83■□□□□ 0.44
VPS52-214ENST00000463486 MIF4GDA9UHW6 222 aaKnown RBP17.82■□□□□ 0.44
VPS52-214ENST00000463486 PRAMEF26H0Y7S4 382 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 KRT86O43790 486 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 MMP20O60882 483 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 PAK4O96013 591 aaPredicted RBP17.82■□□□□ 0.44
VPS52-214ENST00000463486 PRLP01236 227 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 SYPP08247 313 aa17.82■□□□□ 0.44
VPS52-214ENST00000463486 MMP12P39900 470 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms