RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 CPA6Q8N4T0 437 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 GRIN3AQ8TCU5 1115 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF473Q8WTR7 871 aaKnown RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 EXT2Q93063 718 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CENPTQ96BT3 561 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 MAGEB18Q96M61 343 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 RILPQ96NA2 401 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 TRIM55Q9BYV6 548 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 TNKS2Q9H2K2 1166 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 NOL6Q9H6R4 1146 aaKnown RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CATSPERZQ9NTU4 200 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 IL1RAPL1Q9NZN1 696 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 DNMT3BQ9UBC3 853 aaKnown RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 HECAQ9UBI9 543 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 GGA2Q9UJY4 613 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 TBC1D30Q9Y2I9 924 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 C1orf232A0A0U1RR37 186 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM95CA0A1B0GW59 222 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 SRRM3A6NNA2 597 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CXorf49A8MYA2 514 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 FOXO6A8MYZ6 492 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CFAP99D6REC4 459 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 KPNA3O00505 521 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 SLC7A4O43246 635 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 LILRB3O75022 631 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 RPP40O75818 363 aaKnown RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 SRP72O76094 671 aaKnown RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 S100BP04271 92 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 MYL2P10916 166 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 ADH5P11766 374 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CEBPBP17676 345 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CTPS1P17812 591 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 GLDCP23378 1020 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 HOXD9P28356 352 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CRABP2P29373 138 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 AKT1P31749 480 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 RPA3P35244 121 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 LIMK2P53671 638 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 IFT88Q13099 833 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 STX3Q13277 289 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CTBP1Q13363 440 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 GRM3Q14832 879 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 PDGFRLQ15198 375 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 N4BP2L1Q5TBK1 243 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 ARMC3Q5W041 872 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 STEAP4Q687X5 459 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 MBLAC2Q68D91 279 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM109BQ6ICB4 259 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 SPATA21Q7Z572 469 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 UNC5BQ8IZJ1 945 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 DCLK2Q8N568 766 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CCNYL1Q8N7R7 359 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 BRSK1Q8TDC3 778 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 STYXQ8WUJ0 223 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 DCAKDQ8WVC6 231 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 SKA2Q8WVK7 121 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 SMARCD2Q92925 531 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 FATE1Q969F0 183 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 THOC1Q96FV9 657 aaKnown RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 DCUN1D1Q96GG9 259 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 RPL10LQ96L21 214 aaKnown RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 MRGPRX2Q96LB1 330 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 KIFC1Q9BW19 673 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 TSSK1BQ9BXA7 367 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 NSUN3Q9H649 340 aaKnown RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 SPHK2Q9NRA0 654 aa4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 FBXO6Q9NRD1 293 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.15□□□□□ -1.75
ATP13A3-206ENST00000461660 MYO18AQ92614 2054 aaKnown RBP4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 A0A1W2PQ67 120 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 SOBPA7XYQ1 873 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 TP73O15350 636 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 PRPF4O43172 522 aaKnown RBP eCLIP4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 PHGDHO43175 533 aaKnown RBP4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 UGT1A9O60656 530 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 VPS26AO75436 327 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 POP4O95707 220 aaKnown RBP4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 ASLP04424 464 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 UGT2B4P06133 528 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 CREB1P16220 341 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 SP100P23497 879 aaPredicted RBP4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 ECT2LQ008S8 904 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 DLG2Q15700 870 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 CHI3L2Q15782 390 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 TSNAXIP1Q2TAA8 658 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 AGAP9Q5VTM2 703 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 AFMIDQ63HM1 303 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF449Q6P9G9 518 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 KDELC1Q6UW63 502 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 SERPINA13PQ6UXR4 307 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 RANBP10Q6VN20 620 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 KYAT3Q6YP21 454 aaKnown RBP4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 CYS1Q717R9 158 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF534Q76KX8 674 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 CMC1Q7Z7K0 106 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 DSG4Q86SJ6 1040 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 TMEM135Q86UB9 458 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 TMEM25Q86YD3 366 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 TMC8Q8IU68 726 aa4.14□□□□□ -1.75
ATP13A3-206ENST00000461660 WDR75Q8IWA0 830 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms