RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 PRR11Q96HE9 360 aaPredicted RBP8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 KLHL32Q96NJ5 620 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 GFM1Q96RP9 751 aaKnown RBP8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 CCDC3Q9BQI4 270 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 LRRC61Q9BV99 259 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 STK33Q9BYT3 514 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 TTYH3Q9C0H2 523 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 SYNDIG1Q9H7V2 258 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 KLF15Q9UIH9 416 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 ACSL6Q9UKU0 697 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 MFHAS1Q9Y4C4 1052 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 DAAM1Q9Y4D1 1078 aa8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 HEMK1Q9Y5R4 338 aaPredicted RBP8.12□□□□□ -1.11
NIF3L1-209ENST00000454952 ANKRD62A6NC57 917 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 RNF103O00237 685 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 PES1O00541 588 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 NTN3O00634 580 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 YY2O15391 372 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 ZW10O43264 779 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 SLC28A2O43868 658 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 MMP20O60882 483 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 GCATO75600 419 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 TMCC1O94876 653 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 LRIG2O94898 1065 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 CD160O95971 181 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 ITGB2P05107 769 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 TPM2P07951 284 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 PLEKP08567 350 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 UCHL3P15374 230 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 TSHRP16473 764 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 KELP23276 732 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 CCKBRP32239 447 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 IGFALSP35858 605 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 ACVRL1P37023 503 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 PTPN9P43378 593 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 HK3P52790 923 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 RHOAP61586 193 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 UBE2HP62256 183 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 NOMO3P69849 1222 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 ATP11AP98196 1134 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 CLN3Q13286 438 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 LY6DQ14210 128 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 NFATC4Q14934 902 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 LRRC14Q15048 493 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 ZSCAN23Q3MJ62 389 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 PARP15Q460N3 678 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 TMEM52BQ4KMG9 183 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 PERM1Q5SV97 790 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 KLHDC7AQ5VTJ3 777 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 TAF3Q5VWG9 929 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 NAA35Q5VZE5 725 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 USP53Q70EK8 1073 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 RAB11FIP2Q7L804 512 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 NLRP14Q86W24 1093 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 IRF2BP1Q8IU81 584 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 RBFAQ8N0V3 343 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 ZSCAN1Q8NBB4 408 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 OR6K2Q8NGY2 324 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 CPA5Q8WXQ8 436 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 NTAN1Q96AB6 310 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 POM121Q96HA1 1249 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 NCAPGQ9BPX3 1015 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 TUBGCP2Q9BSJ2 902 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 CPEB1Q9BZB8 566 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 EDEM3Q9BZQ6 932 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 CATSPERBQ9H7T0 1116 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 METTL5Q9NRN9 209 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 TMPRSS4Q9NRS4 437 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 AKAP7Q9P0M2 348 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 GULP1Q9UBP9 304 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 DNAI1Q9UI46 699 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 AJAP1Q9UKB5 411 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 GPR34Q9UPC5 381 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 ITM2BQ9Y287 266 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 MGAQ8IWI9 3026 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 SPTA1P02549 2419 aa8.11□□□□□ -1.11
NIF3L1-209ENST00000454952 CFAP46Q8IYW2 2715 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 LRRK1Q38SD2 2015 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 SCN8AQ9UQD0 1980 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 MYO18BQ8IUG5 2567 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 LRP4O75096 1905 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 A0A1W2PNU3 283 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CFAP69A5D8W1 941 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 D6RAR5 112 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 F8VZ95 297 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 NVLO15381 856 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 WISP1O95388 367 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 TNFP01375 233 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 JMJD7P0C870 316 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 PNMA6AP0CW24 399 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 LIPCP11150 499 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 PNLIPP16233 465 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 MMP8P22894 467 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 EEF1GP26641 437 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 CD82P27701 267 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 ERCC5P28715 1186 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 SLC5A2P31639 672 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 HTR7P34969 479 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 AIF1P55008 147 aa8.1□□□□□ -1.11
NIF3L1-209ENST00000454952 SRP54P61011 504 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms