RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ZNF211Q13398 564 aaPredicted RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 ZNF805Q5CZA5 627 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 CFAP58Q5T655 872 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 PAPD7Q5XG87 772 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 ITPRIPL1Q6GPH6 555 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 BRAT1Q6PJG6 821 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 TSSK4Q6SA08 328 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 NPNTQ6UXI9 565 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 GDPD4Q6W3E5 623 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 PRICKLE2Q7Z3G6 844 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 MMAAQ8IVH4 418 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 TP53INP2Q8IXH6 220 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 RASGEF1CQ8N431 466 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 CADM4Q8NFZ8 388 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 SLC35B2Q8TB61 432 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 ACTRT1Q8TDG2 376 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 HTR3CQ8WXA8 447 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 NKD2Q969F2 451 aaPredicted RBP8.81□□□□□ -1
COL28A1-205ENST00000453441 LRRC45Q96CN5 670 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 OSBPL9Q96SU4 736 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 LGMNQ99538 433 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 ZDHHC6Q9H6R6 413 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 RBM22Q9NW64 420 aaKnown RBP eCLIP8.81□□□□□ -1
COL28A1-205ENST00000453441 FBXL12Q9NXK8 326 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 ATP8A1Q9Y2Q0 1164 aa8.81□□□□□ -1
COL28A1-205ENST00000453441 GOLGA6L10A0A0M3HER8 536 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 TSPAN11A1L157 253 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 LRRC72A6NJI9 287 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 POM121CA8CG34 1229 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 PGRMC1O00264 195 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 KPNA3O00505 521 aaPredicted RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 ENC1O14682 589 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 AP1G1O43747 822 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 BNIP3LO60238 219 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 OPHN1O60890 802 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 NDUFS2O75306 463 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 LEFTY1O75610 366 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 RHOBTB1O94844 696 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 MAP3K6O95382 1288 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 FGGP02679 453 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 ATP1A1P05023 1023 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 SERPINF2P08697 491 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 STIP1P31948 543 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 NUMBP49757 651 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 TPMTP51580 245 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 NEK3P51956 506 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 RPL26P61254 145 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 LMNB2Q03252 620 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 BCL2L1Q07817 233 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 TCF15Q12870 199 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 ELF2Q15723 593 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 CCNG2Q16589 344 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 LONRF2Q1L5Z9 754 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 TEX44Q53QW1 395 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 ATXN7L2Q5T6C5 722 aaPredicted RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 NEK5Q6P3R8 708 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 DARS2Q6PI48 645 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 NCEH1Q6PIU2 408 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 C4orf22Q6V702 233 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 LEKR1Q6ZMV7 388 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 ERN2Q76MJ5 926 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 ZC3H18Q86VM9 953 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 NDUFAF2Q8N183 169 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 CHST14Q8NCH0 376 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 PRSS33Q8NF86 280 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 GANCQ8TET4 914 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 NANOS1Q8WY41 292 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 LOXL4Q96JB6 756 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 ZC3H10Q96K80 434 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 TEKT5Q96M29 485 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 TPSD1Q9BZJ3 242 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 BTBD1Q9H0C5 482 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 SLC25A51Q9H1U9 297 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 EPC1Q9H2F5 836 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 MTG2Q9H4K7 406 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 PREBQ9HCU5 417 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 NT5MQ9NPB1 228 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 VPS45Q9NRW7 570 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 KLHL8Q9P2G9 620 aaPredicted RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 SAE1Q9UBE0 346 aaPredicted RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 EVLQ9UI08 416 aaPredicted RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 DNPEPQ9ULA0 475 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 RAB23Q9ULC3 237 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 RPL26L1Q9UNX3 145 aaKnown RBP8.8□□□□□ -1
COL28A1-205ENST00000453441 HRH3Q9Y5N1 445 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 SAR1BQ9Y6B6 198 aa8.8□□□□□ -1
COL28A1-205ENST00000453441 IGHV1OR15-9A0A0B4J2B8 117 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 GOLGA6CA6NDK9 693 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 GOLGA6BA6NDN3 693 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 C5orf60A6NFR6 353 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 KCNK1O00180 336 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 RNF103O00237 685 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 MID1O15344 667 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 LIASO43766 372 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 RNASEH2AO75792 299 aaKnown RBP8.79□□□□□ -1
COL28A1-205ENST00000453441 ANXA9O76027 345 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 IL2RAP01589 272 aa8.79□□□□□ -1
COL28A1-205ENST00000453441 JCHAINP01591 159 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms