RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 UGP2Q16851 508 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 BOLA3Q53S33 107 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 BRAT1Q6PJG6 821 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 LZTR1Q8N653 840 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 TSEN2Q8NCE0 465 aaKnown RBP13.02□□□□□ -0.33
CHD3-206ENST00000452447 ZNF548Q8NEK5 533 aaPredicted RBP13.02□□□□□ -0.33
CHD3-206ENST00000452447 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 BTN2A2Q8WVV5 523 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 SYN2Q92777 582 aaPredicted RBP13.02□□□□□ -0.33
CHD3-206ENST00000452447 NXPE2Q96DL1 559 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 APOLD1Q96LR9 279 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 ATP13A3Q9H7F0 1226 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 CWC15Q9P013 229 aaKnown RBP13.02□□□□□ -0.33
CHD3-206ENST00000452447 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.33
CHD3-206ENST00000452447 CLCA2Q9UQC9 943 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 RAXQ9Y2V3 346 aa13.02□□□□□ -0.33
CHD3-206ENST00000452447 H3BRJ5 948 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 K7ESM1 405 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 SERPING1P05155 500 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 GIMD1P0DJR0 217 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 SERPINA4P29622 427 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 DUSP3P51452 185 aaPredicted RBP13.01□□□□□ -0.33
CHD3-206ENST00000452447 ZBED6P86452 979 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 IL10RBQ08334 325 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 PIGHQ14442 188 aaPredicted RBP13.01□□□□□ -0.33
CHD3-206ENST00000452447 RFTN1Q14699 578 aaPredicted RBP13.01□□□□□ -0.33
CHD3-206ENST00000452447 NFKBIBQ15653 356 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 SMTNL2Q2TAL5 461 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 HGSNATQ68CP4 663 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 CYP4V2Q6ZWL3 525 aaPredicted RBP13.01□□□□□ -0.33
CHD3-206ENST00000452447 SRLQ86TD4 932 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 CAMK1DQ8IU85 385 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 NPWQ8N729 165 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 CAAP1Q9H8G2 361 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 USP29Q9HBJ7 922 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 PCDH12Q9NPG4 1184 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 LHX6Q9UPM6 363 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 LUC7L2Q9Y383 392 aaKnown RBP13.01□□□□□ -0.33
CHD3-206ENST00000452447 AK5Q9Y6K8 562 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 CSNK1G3Q9Y6M4 447 aa13.01□□□□□ -0.33
CHD3-206ENST00000452447 TSPAN11A1L157 253 aa13□□□□□ -0.33
CHD3-206ENST00000452447 TOR1BO14657 336 aa13□□□□□ -0.33
CHD3-206ENST00000452447 AQP9O43315 295 aa13□□□□□ -0.33
CHD3-206ENST00000452447 LZTS3O60299 673 aaPredicted RBP13□□□□□ -0.33
CHD3-206ENST00000452447 BUB1BO60566 1050 aaPredicted RBP13□□□□□ -0.33
CHD3-206ENST00000452447 IGFALSP35858 605 aa13□□□□□ -0.33
CHD3-206ENST00000452447 EIF4A3P38919 411 aaKnown RBP13□□□□□ -0.33
CHD3-206ENST00000452447 PBX1P40424 430 aa13□□□□□ -0.33
CHD3-206ENST00000452447 CSNK1DP48730 415 aa13□□□□□ -0.33
CHD3-206ENST00000452447 INSM1Q01101 510 aaPredicted RBP13□□□□□ -0.33
CHD3-206ENST00000452447 BCL2L1Q07817 233 aa13□□□□□ -0.33
CHD3-206ENST00000452447 NSUN2Q08J23 767 aaKnown RBP eCLIP13□□□□□ -0.33
CHD3-206ENST00000452447 DPYSQ14117 519 aa13□□□□□ -0.33
CHD3-206ENST00000452447 LRRC14Q15048 493 aa13□□□□□ -0.33
CHD3-206ENST00000452447 DPYSL2Q16555 572 aa13□□□□□ -0.33
CHD3-206ENST00000452447 TMEM52BQ4KMG9 183 aa13□□□□□ -0.33
CHD3-206ENST00000452447 ZCCHC8Q6NZY4 707 aaKnown RBP13□□□□□ -0.33
CHD3-206ENST00000452447 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
CHD3-206ENST00000452447 KDM7AQ6ZMT4 941 aa13□□□□□ -0.33
CHD3-206ENST00000452447 ARHGAP12Q8IWW6 846 aa13□□□□□ -0.33
CHD3-206ENST00000452447 FAM181AQ8N9Y4 354 aa13□□□□□ -0.33
CHD3-206ENST00000452447 LMX1AQ8TE12 382 aa13□□□□□ -0.33
CHD3-206ENST00000452447 HSPH1Q92598 858 aa13□□□□□ -0.33
CHD3-206ENST00000452447 IL12RB2Q99665 862 aa13□□□□□ -0.33
CHD3-206ENST00000452447 SLC13A1Q9BZW2 595 aa13□□□□□ -0.33
CHD3-206ENST00000452447 THAP2Q9H0W7 228 aa13□□□□□ -0.33
CHD3-206ENST00000452447 MBNL1Q9NR56 388 aaKnown RBP13□□□□□ -0.33
CHD3-206ENST00000452447 STAU2Q9NUL3 570 aaKnown RBP eCLIP13□□□□□ -0.33
CHD3-206ENST00000452447 NCKIPSDQ9NZQ3 722 aa13□□□□□ -0.33
CHD3-206ENST00000452447 SPASTQ9UBP0 616 aa13□□□□□ -0.33
CHD3-206ENST00000452447 APOBEC3BQ9UH17 382 aaKnown RBP13□□□□□ -0.33
CHD3-206ENST00000452447 KLF15Q9UIH9 416 aa13□□□□□ -0.33
CHD3-206ENST00000452447 CAPN11Q9UMQ6 739 aa13□□□□□ -0.33
CHD3-206ENST00000452447 GPSM3Q9Y4H4 160 aa13□□□□□ -0.33
CHD3-206ENST00000452447 ITPR1Q14643 2758 aa13□□□□□ -0.33
CHD3-206ENST00000452447 RIOK3O14730 519 aaKnown RBP12.99□□□□□ -0.33
CHD3-206ENST00000452447 TPM3P06753 285 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 C6P13671 934 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 IL1R2P27930 398 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 SCNN1BP51168 640 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 RENBPP51606 427 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 POLR2LP62875 67 aaKnown RBP12.99□□□□□ -0.33
CHD3-206ENST00000452447 PPARDQ03181 441 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 EIF2B5Q13144 721 aaKnown RBP12.99□□□□□ -0.33
CHD3-206ENST00000452447 LBRQ14739 615 aaKnown RBP12.99□□□□□ -0.33
CHD3-206ENST00000452447 IRF4Q15306 451 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 TPRG1LQ5T0D9 272 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 FAXCQ5TGI0 409 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 C19orf48Q6RUI8 117 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 ARHGAP36Q6ZRI8 547 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 CACTIN-AS1Q8N1I8 211 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 TP53I13Q8NBR0 393 aaPredicted RBP12.99□□□□□ -0.33
CHD3-206ENST00000452447 RFFLQ8WZ73 363 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 NUP85Q9BW27 656 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 NRSN2Q9GZP1 204 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 ABCG4Q9H172 646 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 IFNKQ9P0W0 207 aa12.99□□□□□ -0.33
CHD3-206ENST00000452447 SEPT3Q9UH03 358 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms