RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SCN11AQ9UI33 1791 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 CCDC154A6NI56 674 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 C9IYK1 514 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 DLX3O60479 287 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 TSC22D2O75157 780 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 CPB1P15086 417 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 LMO2P25791 158 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 GJA9P57773 515 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 GPR158Q5T848 1215 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 IQSEC1Q6DN90 963 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 NCCRP1Q6ZVX7 275 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 CHSY3Q70JA7 882 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 OR2T34Q8NGX1 318 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 OR2T3Q8NH03 318 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 FNDC8Q8TC99 324 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 AFG1LQ8WV93 481 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 ISOC1Q96CN7 298 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 STRA6Q9BX79 667 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 LHX5Q9H2C1 402 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 LATS2Q9NRM7 1088 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 SACM1LQ9NTJ5 587 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 SETD4Q9NVD3 440 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 TBC1D13Q9NVG8 400 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 PTGDR2Q9Y5Y4 395 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 TTC24A2A3L6 582 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 H0Y858 1186 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 TFECO14948 347 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 CPOXP36551 454 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 CYP2A13Q16696 494 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ATG16L2Q8NAA4 619 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 HDAC10Q969S8 669 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 MTFMTQ96DP5 389 aaKnown RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ACOX2Q99424 681 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 HMG20AQ9NP66 347 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ERAP1Q9NZ08 941 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 SYNDIG1LA6NDD5 238 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 FBP2O00757 339 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 SCAMP3O14828 347 aaKnown RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 PPEF2O14830 753 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 DYNC1LI2O43237 492 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 HBP1O60381 514 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 H2AFYO75367 372 aaKnown RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 SEC24AO95486 1093 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ARF4P18085 180 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 NPY2RP49146 381 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 PRKCQQ04759 706 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 DDX39BQ13838 428 aaKnown RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ZNF235Q14590 738 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 AARS2Q5JTZ9 985 aaKnown RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ILDR2Q71H61 639 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 PIWIL4Q7Z3Z4 852 aaKnown RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 GATAD2AQ86YP4 633 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 LILRA2Q8N149 483 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 CDYL2Q8N8U2 506 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ACVR1CQ8NER5 493 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 TSPAN17Q96FV3 270 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 FCRL3Q96P31 734 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 UNC93B1Q9H1C4 597 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 MTF2Q9Y483 593 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 MOXD2PA6NHM9 499 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ZSCAN9O15535 394 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 HTRA2O43464 458 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 POU1F1P28069 291 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 L1CAMP32004 1257 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 GRIK1P39086 918 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 ECT2LQ008S8 904 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 MERTKQ12866 999 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 RABL3Q5HYI8 236 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 MARVELD2Q8N4S9 558 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 TMEM74Q96NL1 305 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 KLHL5Q96PQ7 755 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 HERC2P3Q9BVR0 1158 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
UBE3B-204ENST00000449510 CASS4Q9NQ75 786 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 SCN3BQ9NY72 215 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
UBE3B-204ENST00000449510 RBP1P09455 135 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 TEX44Q53QW1 395 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 DLK2Q6UY11 383 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 LRRC8DQ7L1W4 858 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 ZFP14Q9HCL3 533 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 MPP6Q9NZW5 540 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 M0QZ92 97 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 MATN2O00339 956 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 FFAR3O14843 346 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 GPR42O15529 346 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 HOXC6P09630 235 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 IL7RP16871 459 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 ELK4P28324 431 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 ACADSBP45954 432 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 CDK9P50750 372 aaKnown RBP12.47□□□□□ -0.41
UBE3B-204ENST00000449510 ZRANB3Q5FWF4 1079 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 BROXQ5VW32 411 aa12.47□□□□□ -0.41
UBE3B-204ENST00000449510 FAM219BQ5XKK7 198 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms